C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: V-set and immunoglobulin domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101842 VSIG1 9606 + X:108044970-108079184 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217957 VSIG1-001 108045014-108079097 protein_coding
  ENST00000415430 VSIG1-201 108044970-108079184 protein_coding
  ENST00000458383 VSIG1-003 108045065-108067118 protein_coding
  ENST00000479635 VSIG1-004 108072796-108073853 retained_intron
  ENST00000485533 VSIG1-002 108064739-108073264 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217957ENST00000415430ENST00000485533
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217957 0.068±0.00 0.469±0.00 0.126±0.07 0.048±0.03 0.032±0.00 0.022±0.00 0.097±0.00 0.112±0.00 0.179±0.00 0.075±0.00 0.073±0.06 0.155±0.00 16.016±6.28
ENST00000415430 N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A 0.138±0.00 N/A
ENST00000485533 N/A N/A 0.298±0.00 0.258±0.00 N/A N/A N/A 1.511±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JG CIL_0006JG_0001 CGP X:107980864-108079184
CIL_0006JJ CIL_0006JJ_0001 CGP X:108044970-108091618

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031430 Vsig1 V-set and immunoglobulin domain containing 1 protein_coding Mus_musculus

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