C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: V-set and immunoglobulin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217957 VSIG1-001 ENSG00000101842 9606 + X:108045014-108079097 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217957
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217957 0.068±0.00 0.469±0.00 0.126±0.07 0.048±0.03 0.032±0.00 0.022±0.00 0.097±0.00 0.112±0.00 0.179±0.00 0.075±0.00 0.073±0.06 0.155±0.00 16.016±6.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JG CIL_0006JG_0001 CGP X:107980864-108079184
CIL_0006JJ CIL_0006JJ_0001 CGP X:108044970-108091618

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033806 Vsig1-001 protein_coding Mus_musculus 0 739
ENSMUST00000127629 Vsig1-002 processed_transcript Mus_musculus 0 484
ENSMUST00000114764 Slc26a8-002 protein_coding Mus_musculus 0.00000009 64
ENSDART00000148606 si:ch211-57m13.8-001 protein_coding Danio_rerio 0.00002 57

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