C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006JJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101842-ENSG00000101843 CGP 9606 X:108044970-108091618
GeneTranscriptPositionBiotype
ENSG00000101842 (VSIG1)
V-set and immunoglobulin domain containing 1
ENST00000217957 (VSIG1-001) 108045014-108079097 protein_coding
ENST00000415430 (VSIG1-201) 108044970-108079184 protein_coding
ENST00000458383 (VSIG1-003) 108045065-108067118 protein_coding
ENST00000479635 (VSIG1-004) 108072796-108073853 retained_intron
ENST00000485533 (VSIG1-002) 108064739-108073264 processed_transcript
ENSG00000101843 (PSMD10)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
ENST00000217958 (PSMD10-001) 108084207-108091618 protein_coding
ENST00000338548 (PSMD10-003) 108088480-108091549 retained_intron
ENST00000340200 (PSMD10-006) 108084843-108091520 protein_coding
ENST00000361815 (PSMD10-002) 108084830-108091542 protein_coding
ENST00000372295 (PSMD10-004) 108084775-108091542 protein_coding
ENST00000372296 (PSMD10-005) 108084597-108091542 protein_coding
ENST00000553388 (PSMD10-007) 108087045-108091538 retained_intron
CIL_0006JJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031430-ENSMUSG00000031429 CGP 10090 X:140907608-140956728
GeneTranscriptPositionBiotype
ENSMUSG00000031429 (Psmd10)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
ENSMUST00000033805 (Psmd10-001) 140948429-140956689 protein_coding
ENSMUST00000112978 (Psmd10-002) 140948429-140956728 protein_coding
ENSMUSG00000031430 (Vsig1)
V-set and immunoglobulin domain containing 1
ENSMUST00000033806 (Vsig1-001) 140907608-140939472 protein_coding
ENSMUST00000127629 (Vsig1-002) 140923189-140938233 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JJ_0001ENSG00000101842ENST00000217957ENST00000415430ENST00000458383ENST00000479635ENST00000485533ENSG00000101843ENST00000217958ENST00000338548ENST00000340200ENST00000361815ENST00000372295ENST00000372296ENST00000553388CIL_0006JJ_0002ENSMUSG00000031429ENSMUST00000033805ENSMUST00000112978ENSMUSG00000031430ENSMUST00000033806ENSMUST00000127629
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JJ_0001ENSG00000101842ENST00000217957ENST00000415430ENST00000485533ENSG00000101843ENST00000217958ENST00000338548ENST00000340200ENST00000361815ENST00000372295ENST00000372296CIL_0006JJ_0002ENSMUSG00000031429ENSMUST00000033805ENSMUST00000112978ENSMUSG00000031430ENSMUST00000033806ENSMUST00000127629
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101842 ENST00000217957 0.068±0.00 0.469±0.00 N/A 0.126±0.07 0.048±0.03 0.032±0.00 0.022±0.00 0.097±0.00 0.112±0.00 0.179±0.00 0.075±0.00 0.073±0.06 0.155±0.00 16.016±6.28
ENST00000415430 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A 0.138±0.00 N/A
ENST00000458383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485533 N/A N/A N/A 0.298±0.00 0.258±0.00 N/A N/A N/A 1.511±0.00 N/A N/A N/A N/A N/A
ENSG00000101843 ENST00000217958 4.943±0.00 7.194±0.00 1.207±0.00 13.280±3.51 6.516±1.41 6.982±2.86 1.873±0.55 5.265±2.47 3.864±1.88 6.882±4.38 1.822±0.06 11.710±4.89 11.647±3.35 10.590±7.25
ENST00000338548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.632±0.00 6.845±0.00 3.773±0.00
ENST00000340200 5.619±0.00 4.836±0.00 3.994±0.00 6.123±0.00 5.925±0.13 4.464±0.00 0.672±0.00 0.931±0.00 3.527±0.00 6.580±0.00 2.069±1.02 2.564±0.00 N/A 6.528±0.00
ENST00000361815 N/A N/A 2.089±0.00 7.889±1.76 N/A 1.627±0.00 0.614±0.00 N/A N/A N/A N/A 5.192±0.00 N/A N/A
ENST00000372295 N/A N/A N/A N/A N/A N/A 1.180±0.23 N/A N/A 4.167±2.45 N/A N/A N/A N/A
ENST00000372296 3.269±0.00 6.346±0.00 N/A 8.299±0.00 5.281±0.00 9.446±0.00 1.457±0.00 6.698±0.00 3.514±0.00 6.327±0.00 1.006±0.00 1.641±0.00 1.681±0.00 4.812±0.00
ENST00000553388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031429 ENSMUST00000033805 3.390±0.50 1.784±0.37 6.341±0.46 3.789±1.77 3.067±1.00 3.864±0.43 2.885±0.44 5.348±1.03 7.555±5.19 3.075±0.44 3.496±0.61 3.825±2.87 7.777±3.43 4.192±1.60
ENSMUST00000112978 1.081±0.37 0.509±0.00 2.249±0.13 2.429±0.35 1.004±0.54 0.682±0.10 0.792±0.00 1.220±0.50 1.736±1.26 1.334±0.55 0.657±0.18 1.647±0.80 3.055±1.22 1.345±0.44
ENSMUSG00000031430 ENSMUST00000033806 0.222±0.15 N/A 0.005±0.00 N/A N/A 3.173±0.89 0.027±0.01 0.049±0.03 0.011±0.00 0.127±0.04 N/A N/A 0.012±0.00 7.302±0.64
ENSMUST00000127629 0.264±0.06 N/A 0.012±0.00 0.018±0.00 0.067±0.00 1.231±0.18 N/A 0.039±0.01 0.024±0.01 0.134±0.05 N/A 0.023±0.00 0.039±0.03 30.312±7.43

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