C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sushi-repeat containing protein, X-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101955 SRPX 9606 - X:38149336-38220924 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378533 SRPX-003 38149339-38220899 protein_coding
  ENST00000432886 SRPX-201 38149336-38220924 protein_coding
  ENST00000461865 SRPX-002 38149631-38154581 processed_transcript
  ENST00000479015 SRPX-001 38149351-38160098 processed_transcript
  ENST00000538295 SRPX-202 38149336-38220924 protein_coding
  ENST00000544439 SRPX-203 38149336-38220924 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378533ENST00000432886ENST00000479015ENST00000538295ENST00000544439
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378533 31.964±0.00 23.325±0.00 N/A 1.196±0.64 8.869±2.12 28.553±25.11 8.771±6.01 3.094±1.46 3.539±0.78 9.521±6.52 N/A 3.029±2.45 32.093±14.55 17.386±0.00
ENST00000432886 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.730±0.00 0.422±0.37 N/A N/A N/A
ENST00000479015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.808±0.00 N/A N/A N/A
ENST00000538295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.622±0.00
ENST00000544439 38.843±0.00 21.407±0.00 0.775±0.00 1.068±0.74 12.345±0.00 22.661±21.02 7.232±0.00 2.621±0.00 9.248±2.25 5.915±0.00 3.442±0.00 4.630±2.62 8.183±0.21 21.611±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Z7 CIL_0005Z7_0001 CGP X:38006582-38220924
CIL_0005YZ CIL_0005YZ_0001 CGP X:38149336-38327564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001845 IEA phagolysosome assembly
GO:0005515 IEA protein binding
GO:0005776 IEA autophagic vacuole
GO:0005783 IEA endoplasmic reticulum
GO:0006914 IEA autophagy
GO:0007155 IEA cell adhesion
GO:0016020 TAS membrane
GO:0034976 IEA response to endoplasmic reticulum stress
GO:0060244 IEA negative regulation of cell proliferation involved in contact inhibition
GO:2001241 IEA positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010318 srpx sushi-repeat-containing protein protein_coding Danio_rerio
ENSMUSG00000090084 Srpx sushi-repeat-containing protein protein_coding Mus_musculus

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