C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi-repeat containing protein, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378533 SRPX-003 ENSG00000101955 9606 - X:38149339-38220899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000378533
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000378533 31.964±0.00 23.325±0.00 1.196±0.64 8.869±2.12 28.553±25.11 8.771±6.01 3.094±1.46 3.539±0.78 9.521±6.52 3.029±2.45 32.093±14.55 17.386±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Z7 CIL_0005Z7_0001 CGP X:38006582-38220924
CIL_0005YZ CIL_0005YZ_0001 CGP X:38149336-38327564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001845 IEA phagolysosome assembly
GO:0005515 IEA protein binding
GO:0005776 IEA autophagic vacuole
GO:0005783 IEA endoplasmic reticulum
GO:0006914 IEA autophagy
GO:0007155 IEA cell adhesion
GO:0016020 TAS membrane
GO:0034976 IEA response to endoplasmic reticulum stress
GO:0060244 IEA negative regulation of cell proliferation involved in contact inhibition
GO:2001241 IEA positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044789 Srpx-001 protein_coding Mus_musculus 0 1760
ENSMUST00000115544 Srpx-002 protein_coding Mus_musculus 0 1613
ENSMUST00000115543 Srpx-003 protein_coding Mus_musculus 0 1286

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