C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sushi-repeat-containing protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090084 Srpx 10090 - X:10037977-10117709 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044789 Srpx-001 10037977-10117682 protein_coding
  ENSMUST00000115543 Srpx-003 10038907-10117605 protein_coding
  ENSMUST00000115544 Srpx-002 10038556-10117709 protein_coding
  ENSMUST00000147334 Srpx-004 10073621-10117676 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000044789ENSMUST00000115543ENSMUST00000115544ENSMUST00000147334
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000044789 5.979±2.70 1.049±0.05 4.178±0.83 16.833±3.50 2.828±0.67 0.666±0.20 1.526±0.32 0.092±0.01 5.737±0.43 0.234±0.03 3.966±1.19 2.408±0.00
ENSMUST00000115543 3.152±0.00 N/A N/A N/A N/A N/A N/A 0.109±0.02 N/A 0.597±0.00 N/A N/A
ENSMUST00000115544 6.303±2.36 1.719±0.41 17.735±0.37 29.026±12.62 3.384±1.12 1.854±0.16 1.858±0.25 0.557±0.39 3.014±0.58 0.821±0.28 3.754±0.76 3.219±3.28
ENSMUST00000147334 N/A 9.080±1.86 N/A 40.838±8.61 7.396±1.70 N/A N/A 0.409±0.19 8.790±0.90 N/A 7.110±1.53 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Z7 CIL_0005Z7_0002 CGP X:9885622-10117709
CIL_0005YZ CIL_0005YZ_0002 CGP X:10037977-10216920

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001845 IMP phagolysosome assembly
GO:0005515 IPI protein binding
GO:0005776 IDA autophagic vacuole
GO:0005783 IDA endoplasmic reticulum
GO:0006914 IMP autophagy
GO:0034976 IMP response to endoplasmic reticulum stress
GO:0060244 IDA negative regulation of cell proliferation involved in contact inhibition
GO:2001241 IMP positive regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010318 srpx sushi-repeat-containing protein protein_coding Danio_rerio
ENSG00000101955 SRPX sushi-repeat containing protein, X-linked protein_coding Homo_sapiens

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