C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Z7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147041-ENSG00000101955 CGP 9606 X:38006582-38220924
GeneTranscriptPositionBiotype
ENSG00000101955 (SRPX)
sushi-repeat containing protein, X-linked 		ENST00000378533 (SRPX-003) 38149339-38220899 protein_coding
ENST00000432886 (SRPX-201) 38149336-38220924 protein_coding
ENST00000461865 (SRPX-002) 38149631-38154581 processed_transcript
ENST00000479015 (SRPX-001) 38149351-38160098 processed_transcript
ENST00000538295 (SRPX-202) 38149336-38220924 protein_coding
ENST00000544439 (SRPX-203) 38149336-38220924 protein_coding
ENSG00000147041 (SYTL5)
synaptotagmin-like 5 		ENST00000297875 (SYTL5-001) 38006582-38128816 protein_coding
ENST00000456733 (SYTL5-201) 38033534-38128819 protein_coding
ENSG00000221466 (MIR548AJ2)
microRNA 548aj-2 		ENST00000408539 (MIR548AJ2-201) 38023895-38023986 miRNA
CIL_0005Z7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054453-ENSMUSG00000090084 CGP 10090 X:9885622-10117709
GeneTranscriptPositionBiotype
ENSMUSG00000031174 (Rpgr)
retinitis pigmentosa GTPase regulator 		ENSMUST00000044598 (Rpgr-001) 10158216-10216920 protein_coding
ENSMUST00000072393 (Rpgr-006) 10073621-10216920 protein_coding
ENSMUST00000073392 (Rpgr-003) 10158216-10216920 protein_coding
ENSMUST00000115532 (Rpgr-002) 10160608-10216920 protein_coding
ENSMUST00000115533 (Rpgr-005) 10158372-10216920 protein_coding
ENSMUST00000115534 (Rpgr-004) 10158216-10216453 protein_coding
ENSMUST00000124744 (Rpgr-008) 10207001-10216733 retained_intron
ENSMUST00000143532 (Rpgr-009) 10213548-10216482 processed_transcript
ENSMUST00000155734 (Rpgr-007) 10180968-10216758 retained_intron
ENSMUSG00000054453 (Sytl5)
synaptotagmin-like 5 		ENSMUST00000067529 (Sytl5-001) 9885622-9994543 protein_coding
ENSMUST00000086165 (Sytl5-002) 9885622-9994543 protein_coding
ENSMUSG00000081898 (Gm5754)
predicted gene 5754 		ENSMUST00000118774 (Gm5754-001) 10011788-10012679 processed_pseudogene
ENSMUSG00000090084 (Srpx)
sushi-repeat-containing protein 		ENSMUST00000044789 (Srpx-001) 10037977-10117682 protein_coding
ENSMUST00000115543 (Srpx-003) 10038907-10117605 protein_coding
ENSMUST00000115544 (Srpx-002) 10038556-10117709 protein_coding
ENSMUST00000147334 (Srpx-004) 10073621-10117676 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Z7_0001ENSG00000101955ENST00000378533ENST00000432886ENST00000461865ENST00000479015ENST00000538295ENST00000544439ENSG00000147041ENST00000297875ENST00000456733ENSG00000221466ENST00000408539CIL_0005Z7_0002ENSMUSG00000031174ENSMUST00000044598ENSMUST00000072393ENSMUST00000073392ENSMUST00000115532ENSMUST00000115533ENSMUST00000115534ENSMUST00000124744ENSMUST00000143532ENSMUST00000155734ENSMUSG00000054453ENSMUST00000067529ENSMUST00000086165ENSMUSG00000081898ENSMUST00000118774ENSMUSG00000090084ENSMUST00000044789ENSMUST00000115543ENSMUST00000115544ENSMUST00000147334
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Z7_0001ENSG00000101955ENST00000378533ENST00000432886ENST00000479015ENST00000538295ENST00000544439ENSG00000147041ENST00000297875ENST00000456733ENSG00000221466ENST00000408539CIL_0005Z7_0002ENSMUSG00000031174ENSMUST00000044598ENSMUST00000072393ENSMUST00000073392ENSMUST00000115532ENSMUST00000115533ENSMUST00000115534ENSMUST00000143532ENSMUST00000155734ENSMUSG00000054453ENSMUST00000067529ENSMUST00000086165ENSMUSG00000081898ENSMUST00000118774ENSMUSG00000090084ENSMUST00000044789ENSMUST00000115543ENSMUST00000115544ENSMUST00000147334
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101955 ENST00000378533 31.964±0.00 23.325±0.00 N/A 1.196±0.64 8.869±2.12 28.553±25.11 8.771±6.01 3.094±1.46 3.539±0.78 9.521±6.52 N/A 3.029±2.45 32.093±14.55 17.386±0.00
ENST00000432886 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.730±0.00 0.422±0.37 N/A N/A N/A
ENST00000461865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.808±0.00 N/A N/A N/A
ENST00000538295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.622±0.00
ENST00000544439 38.843±0.00 21.407±0.00 0.775±0.00 1.068±0.74 12.345±0.00 22.661±21.02 7.232±0.00 2.621±0.00 9.248±2.25 5.915±0.00 3.442±0.00 4.630±2.62 8.183±0.21 21.611±0.00
ENSG00000147041 ENST00000297875 N/A N/A 0.005±0.00 N/A 2.668±0.00 0.305±0.00 0.052±0.00 0.689±0.00 0.730±0.00 N/A N/A 0.830±0.54 1.929±0.53 0.529±0.33
ENST00000456733 0.022±0.00 0.010±0.00 0.023±0.00 0.179±0.00 0.096±0.00 0.405±0.21 0.057±0.00 0.272±0.00 0.284±0.00 0.242±0.15 N/A 0.627±0.00 N/A 0.218±0.00
ENSG00000221466 ENST00000408539 N/A N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031174 ENSMUST00000044598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00 N/A N/A N/A
ENSMUST00000072393 N/A N/A N/A 6.156±0.00 N/A N/A N/A N/A N/A N/A N/A 5.588±3.92 5.600±1.31 N/A
ENSMUST00000073392 N/A N/A N/A 5.896±0.00 N/A N/A N/A 0.674±0.04 0.378±0.01 1.787±0.10 0.253±0.02 N/A 1.339±0.30 3.649±0.44
ENSMUST00000115532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.499±0.00 N/A 15.713±27.12
ENSMUST00000115533 N/A N/A N/A N/A N/A N/A 0.625±0.07 N/A 0.274±0.16 N/A 0.300±0.09 2.001±0.45 0.646±0.06 1.888±0.00
ENSMUST00000115534 N/A N/A N/A 2.640±0.00 N/A N/A N/A 0.806±0.00 0.269±0.11 N/A 0.253±0.05 2.377±0.00 0.279±0.00 N/A
ENSMUST00000124744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143532 N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.07 N/A N/A N/A N/A N/A
ENSMUST00000155734 N/A 1.201±0.10 N/A N/A N/A N/A N/A N/A 0.279±0.27 N/A N/A 1.312±0.00 N/A N/A
ENSMUSG00000054453 ENSMUST00000067529 0.193±0.07 0.786±0.00 N/A 0.557±0.68 0.075±0.00 0.108±0.03 N/A N/A 0.192±0.12 N/A N/A 0.212±0.16 0.015±0.00 0.476±0.15
ENSMUST00000086165 0.869±0.03 0.419±0.21 N/A N/A 0.081±0.04 0.083±0.01 0.027±0.01 0.101±0.04 0.304±0.08 0.087±0.04 N/A 0.307±0.19 0.019±0.01 1.304±0.00
ENSMUSG00000081898 ENSMUST00000118774 N/A N/A 0.048±0.01 0.054±0.00 0.066±0.00 N/A N/A N/A 0.021±0.01 N/A N/A 0.054±0.00 0.007±0.00 0.059±0.00
ENSMUSG00000090084 ENSMUST00000044789 5.979±2.70 1.049±0.05 4.178±0.83 N/A 16.833±3.50 2.828±0.67 0.666±0.20 1.526±0.32 0.092±0.01 5.737±0.43 0.234±0.03 3.966±1.19 2.408±0.00 N/A
ENSMUST00000115543 3.152±0.00 N/A N/A N/A N/A N/A N/A N/A 0.109±0.02 N/A 0.597±0.00 N/A N/A N/A
ENSMUST00000115544 6.303±2.36 1.719±0.41 17.735±0.37 N/A 29.026±12.62 3.384±1.12 1.854±0.16 1.858±0.25 0.557±0.39 3.014±0.58 0.821±0.28 3.754±0.76 3.219±3.28 N/A
ENSMUST00000147334 N/A 9.080±1.86 N/A N/A 40.838±8.61 7.396±1.70 N/A N/A 0.409±0.19 8.790±0.90 N/A 7.110±1.53 N/A N/A

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