C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class VI, type 11C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101974 ATP11C 9606 - X:139726346-139945276 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327569 ATP11C-008 139726349-139832288 protein_coding
  ENST00000361648 ATP11C-009 139726349-139832288 protein_coding
  ENST00000370557 ATP11C-001 139726346-139933070 protein_coding
  ENST00000422228 ATP11C-003 139782557-139789430 protein_coding
  ENST00000433868 ATP11C-004 139726349-139745791 protein_coding
  ENST00000450801 ATP11C-002 139726353-139750053 protein_coding
  ENST00000460773 ATP11C-007 139728786-139797281 processed_transcript
  ENST00000471746 ATP11C-006 139750091-139782633 processed_transcript
  ENST00000485626 ATP11C-005 139802302-139945276 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327569ENST00000361648ENST00000370557ENST00000422228ENST00000433868ENST00000450801ENST00000460773ENST00000471746
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327569 1.557±0.00 N/A N/A 1.172±0.00 1.039±0.00 N/A 1.722±0.61 0.847±0.24 N/A N/A 0.704±0.15 0.335±0.00 2.003±0.33
ENST00000361648 N/A N/A N/A 0.701±0.00 N/A N/A N/A N/A N/A N/A 0.600±0.49 0.351±0.00 N/A
ENST00000370557 1.820±0.00 N/A 0.230±0.11 1.265±0.28 1.005±0.12 0.295±0.19 0.835±0.00 0.577±0.00 1.257±0.57 0.563±0.00 0.624±0.30 0.274±0.00 1.060±0.06
ENST00000422228 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.564±0.00 N/A N/A N/A
ENST00000433868 1.667±0.00 2.256±0.00 0.400±0.00 1.116±0.00 1.299±0.00 0.566±0.00 3.051±0.00 1.137±0.00 1.512±0.00 N/A 1.661±0.21 0.672±0.00 1.658±0.00
ENST00000450801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.492±0.26 0.360±0.00 N/A
ENST00000460773 N/A N/A 0.248±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.698±0.00
ENST00000471746 N/A N/A N/A N/A N/A 0.571±0.00 N/A N/A N/A N/A N/A 0.841±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PN CIL_0000PN_0002 CGP X:139581770-139945276
CIL_0001AP CIL_0001AP_0001 CGP X:139726346-139965520

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0002329 IEA pre-B cell differentiation
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005765 IDA lysosomal membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0034220 TAS ion transmembrane transport
GO:0045332 NAS phospholipid translocation
GO:0045579 IEA positive regulation of B cell differentiation
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036442 atp11c ATPase, Class VI, type 11C protein_coding Danio_rerio
ENSMUSG00000062949 Atp11c ATPase, class VI, type 11C protein_coding Mus_musculus

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