C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class VI, type 11C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062949 Atp11c 10090 - X:60223290-60592698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033480 Atp11c-201 60223293-60403981 protein_coding
  ENSMUST00000101527 Atp11c-202 60223293-60403981 protein_coding
  ENSMUST00000133295 Atp11c-002 60225623-60266830 processed_transcript
  ENSMUST00000138569 Atp11c-003 60235461-60592698 processed_transcript
  ENSMUST00000154051 Atp11c-001 60223290-60592698 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033480ENSMUST00000101527ENSMUST00000133295ENSMUST00000154051
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033480 N/A 1.338±0.51 N/A 0.978±0.00 1.716±0.38 N/A 0.197±0.01 0.297±0.00 3.716±4.47 5.769±0.00 0.213±0.08 1.192±0.61 0.565±0.29 N/A
ENSMUST00000101527 1.757±0.83 1.657±0.17 1.800±0.01 3.339±1.93 1.999±1.03 1.351±0.00 0.766±0.23 1.160±0.50 8.413±7.82 2.433±1.53 0.296±0.08 1.889±1.23 0.694±0.25 0.600±0.46
ENSMUST00000133295 2.199±0.34 N/A N/A N/A 5.089±1.69 3.993±0.00 1.255±0.16 1.621±0.00 23.760±6.29 3.289±0.53 N/A 3.377±1.35 N/A 1.218±0.25
ENSMUST00000154051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.353±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PN CIL_0000PN_0003 CGP X:60055956-60592698
CIL_0001AP CIL_0001AP_0002 CGP X:60223290-60592698

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0002329 IMP pre-B cell differentiation
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005765 IEA lysosomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0045579 IMP positive regulation of B cell differentiation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036442 atp11c ATPase, Class VI, type 11C protein_coding Danio_rerio
ENSG00000101974 ATP11C ATPase, class VI, type 11C protein_coding Homo_sapiens

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