C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class VI, type 11C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327569 ATP11C-008 ENSG00000101974 9606 - X:139726349-139832288 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverOvaryPlacentaTestisENST00000327569
Transcript ID Adipose Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000327569 1.557±0.00 1.172±0.00 1.039±0.00 1.722±0.61 0.847±0.24 0.704±0.15 0.335±0.00 2.003±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PN CIL_0000PN_0002 CGP X:139581770-139945276
CIL_0001AP CIL_0001AP_0001 CGP X:139726346-139965520

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0002329 IEA pre-B cell differentiation
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005765 IDA lysosomal membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0034220 TAS ion transmembrane transport
GO:0045332 NAS phospholipid translocation
GO:0045579 IEA positive regulation of B cell differentiation
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154051 Atp11c-001 protein_coding Mus_musculus 0 5336
ENSMUST00000101527 Atp11c-202 protein_coding Mus_musculus 0 5334
ENSMUST00000033480 Atp11c-201 protein_coding Mus_musculus 0 4397
ENSMUST00000138569 Atp11c-003 processed_transcript Mus_musculus 0 3410
ENSMUST00000133295 Atp11c-002 processed_transcript Mus_musculus 0 1319

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