C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-like 4A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102178 UBL4A 9606 - X:154483717-154486670 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369653 UBL4A-002 154485193-154486615 protein_coding
  ENST00000369660 UBL4A-001 154483717-154486670 protein_coding
  ENST00000417913 UBL4A-005 154485376-154486586 nonsense_mediated_decay
  ENST00000421431 UBL4A-003 154484283-154486612 nonsense_mediated_decay
  ENST00000477777 UBL4A-004 154485353-154486102 processed_transcript
  ENST00000481237 UBL4A-006 154486042-154486584 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369660ENST00000421431ENST00000477777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369660 4.245±0.00 9.453±0.00 N/A 6.645±4.97 4.659±3.57 13.559±0.00 8.501±7.77 16.904±0.00 3.990±3.45 9.575±0.00 18.196±0.00 10.801±6.80 14.002±4.90 3.604±2.54
ENST00000421431 1.768±0.00 N/A 1.531±0.00 1.254±0.00 N/A 0.875±0.00 4.880±0.00 0.316±0.00 0.771±0.00 N/A 4.002±0.00 0.229±0.00 3.396±0.00 0.729±0.00
ENST00000477777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.931±0.00 7.760±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KI CIL_0006KI_0001 CGP X:154477769-154486670
CIL_0003LF CIL_0003LF_0001 CGP X:154483717-154490690

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005829 IDA cytosol
GO:0006464 TAS cellular protein modification process
GO:0006810 IEA transport
GO:0019787 TAS small conjugating protein ligase activity
GO:0071816 IMP tail-anchored membrane protein insertion into ER membrane
GO:0071818 IDA BAT3 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007359 UBL4A ubiquitin-like 4A protein_coding Danio_rerio
ENSMUSG00000015290 Ubl4 ubiquitin-like 4 protein_coding Mus_musculus

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