C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006KI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196976-ENSG00000102178 CGP 9606 X:154477769-154486670
GeneTranscriptPositionBiotype
ENSG00000196976 (LAGE3)
L antigen family, member 3 		ENST00000357360 (LAGE3-001) 154477769-154479257 protein_coding
ENST00000621786 (LAGE3-201) 154477773-154478912 protein_coding
ENSG00000279563 (CH17-340M24.1)
 ENST00000623541 (CH17-340M24.1-001) 154477032-154477779 TEC
CIL_0006KI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015289-ENSMUSG00000015290 CGP 10090 X:74351276-74373218
GeneTranscriptPositionBiotype
ENSMUSG00000015289 (Lage3)
L antigen family, member 3 		ENSMUST00000015433 (Lage3-001) 74352161-74353618 protein_coding
ENSMUST00000114152 (Lage3-003) 74352162-74353575 protein_coding
ENSMUST00000114153 (Lage3-002) 74351276-74353594 protein_coding
ENSMUSG00000015290 (Ubl4)
ubiquitin-like 4 		ENSMUST00000015434 (Ubl4-005) 74367272-74368466 nonsense_mediated_decay
ENSMUST00000125914 (Ubl4-004) 74367797-74368503 processed_transcript
ENSMUST00000126117 (Ubl4-002) 74365719-74368558 processed_transcript
ENSMUST00000126191 (Ubl4-003) 74367743-74368513 retained_intron
ENSMUST00000140632 (Ubl4-006) 74367310-74368496 retained_intron
ENSMUST00000155676 (Ubl4-001) 74365718-74368673 protein_coding
ENSMUST00000178691 (Ubl4-201) 74367465-74373218 protein_coding
ENSMUSG00000032806 (Slc10a3)
solute carrier family 10 (sodium/bile acid cotransporter family), member 3 		ENSMUST00000037967 (Slc10a3-001) 74369217-74373349 protein_coding
ENSMUST00000073067 (Slc10a3-002) 74369217-74373305 protein_coding
ENSMUST00000114146 (Slc10a3-003) 74369217-74373246 protein_coding
ENSMUST00000114147 (Slc10a3-004) 74369217-74371011 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KI_0001ENSG00000196976ENST00000357360ENST00000621786ENSG00000279563ENST00000623541CIL_0006KI_0002ENSMUSG00000015289ENSMUST00000015433ENSMUST00000114152ENSMUST00000114153ENSMUSG00000015290ENSMUST00000015434ENSMUST00000125914ENSMUST00000126117ENSMUST00000126191ENSMUST00000140632ENSMUST00000155676ENSMUST00000178691ENSMUSG00000032806ENSMUST00000037967ENSMUST00000073067ENSMUST00000114146ENSMUST00000114147
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KI_0001ENSG00000196976ENST00000357360ENST00000621786ENSG00000279563ENST00000623541CIL_0006KI_0002ENSMUSG00000015289ENSMUST00000015433ENSMUST00000114152ENSMUST00000114153ENSMUSG00000015290ENSMUST00000015434ENSMUST00000125914ENSMUST00000126117ENSMUST00000155676ENSMUST00000178691ENSMUSG00000032806ENSMUST00000037967ENSMUST00000073067ENSMUST00000114146ENSMUST00000114147
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196976 ENST00000357360 3.565±0.00 6.143±0.00 N/A 1.992±0.72 3.371±0.00 7.205±0.00 2.213±0.00 4.136±0.00 1.226±1.10 5.251±0.00 4.869±0.00 3.105±0.34 5.839±0.60 2.926±1.35
ENST00000621786 7.667±0.00 10.593±0.00 N/A 11.960±10.23 11.480±0.00 10.001±0.00 6.459±6.29 11.390±0.00 13.332±0.00 5.722±4.91 11.734±0.00 21.943±19.64 14.238±6.70 13.259±6.39
ENSG00000279563 ENST00000623541 N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A N/A 0.535±0.04 N/A 0.624±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015289 ENSMUST00000015433 22.747±2.06 25.469±4.54 18.616±3.59 14.450±8.01 17.716±2.64 17.469±8.11 10.484±1.36 22.954±5.95 22.040±14.93 16.722±2.00 12.326±1.70 22.184±8.18 12.292±5.94 2.820±1.30
ENSMUST00000114152 N/A N/A N/A 1.740±0.00 2.410±0.00 N/A N/A N/A N/A N/A N/A 4.500±1.42 1.214±0.00 0.336±0.00
ENSMUST00000114153 N/A N/A N/A 0.238±0.00 0.755±0.00 N/A N/A N/A N/A N/A N/A 0.968±0.39 0.128±0.00 0.226±0.01
ENSMUSG00000015290 ENSMUST00000015434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.574±0.00 0.830±0.00
ENSMUST00000125914 N/A N/A N/A 28.486±0.00 N/A N/A N/A N/A N/A N/A N/A 41.637±0.00 49.334±12.86 3.747±0.00
ENSMUST00000126117 N/A N/A N/A 4.711±0.75 11.537±0.00 N/A N/A N/A N/A N/A N/A 15.133±0.52 3.152±0.00 0.993±0.00
ENSMUST00000126191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155676 21.735±1.77 27.411±3.07 23.949±3.59 11.757±4.51 16.913±3.28 18.402±2.48 31.234±1.11 19.599±3.87 13.402±1.08 18.020±0.76 25.345±1.48 21.011±8.66 9.708±4.45 1.793±0.82
ENSMUST00000178691 N/A 9.142±0.75 N/A N/A 6.019±0.08 12.203±1.02 N/A N/A 11.682±4.92 N/A N/A 14.163±0.00 14.796±5.70 3.509±1.61
ENSMUSG00000032806 ENSMUST00000037967 5.341±0.94 7.587±0.66 5.934±1.24 N/A N/A N/A N/A 4.972±0.00 3.416±0.00 N/A N/A N/A 3.991±0.00 1.814±0.55
ENSMUST00000073067 7.150±0.46 N/A N/A N/A 7.766±3.71 7.952±0.68 N/A 6.935±1.05 4.917±0.31 4.694±0.00 N/A N/A 5.407±0.60 2.020±0.45
ENSMUST00000114146 6.603±0.91 14.300±4.23 N/A N/A 8.429±3.36 10.509±3.69 N/A 5.438±0.00 3.932±0.66 10.414±1.72 N/A 19.649±4.82 5.262±0.00 0.164±0.00
ENSMUST00000114147 N/A N/A N/A N/A 8.524±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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