C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003LF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102178-ENSG00000126903 CGP 9606 X:154483717-154490690
GeneTranscriptPositionBiotype
ENSG00000126903 (SLC10A3)
solute carrier family 10, member 3
ENST00000263512 (SLC10A3-201) 154487306-154490690 protein_coding
ENST00000369649 (SLC10A3-001) 154487306-154490614 protein_coding
ENST00000393586 (SLC10A3-004) 154487311-154490628 protein_coding
ENST00000393587 (SLC10A3-002) 154487343-154490663 protein_coding
ENST00000453912 (SLC10A3-003) 154488287-154490677 protein_coding
CIL_0003LF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015290-ENSMUSG00000032806 CGP 10090 X:74365718-74373349
GeneTranscriptPositionBiotype
ENSMUSG00000015290 (Ubl4)
ubiquitin-like 4
ENSMUST00000015434 (Ubl4-005) 74367272-74368466 nonsense_mediated_decay
ENSMUST00000125914 (Ubl4-004) 74367797-74368503 processed_transcript
ENSMUST00000126117 (Ubl4-002) 74365719-74368558 processed_transcript
ENSMUST00000126191 (Ubl4-003) 74367743-74368513 retained_intron
ENSMUST00000140632 (Ubl4-006) 74367310-74368496 retained_intron
ENSMUST00000155676 (Ubl4-001) 74365718-74368673 protein_coding
ENSMUST00000178691 (Ubl4-201) 74367465-74373218 protein_coding
ENSMUSG00000032806 (Slc10a3)
solute carrier family 10 (sodium/bile acid cotransporter family), member 3
ENSMUST00000037967 (Slc10a3-001) 74369217-74373349 protein_coding
ENSMUST00000073067 (Slc10a3-002) 74369217-74373305 protein_coding
ENSMUST00000114146 (Slc10a3-003) 74369217-74373246 protein_coding
ENSMUST00000114147 (Slc10a3-004) 74369217-74371011 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LF_0001ENSG00000126903ENST00000263512ENST00000369649ENST00000393586ENST00000393587ENST00000453912CIL_0003LF_0002ENSMUSG00000015290ENSMUST00000015434ENSMUST00000125914ENSMUST00000126117ENSMUST00000126191ENSMUST00000140632ENSMUST00000155676ENSMUST00000178691ENSMUSG00000032806ENSMUST00000037967ENSMUST00000073067ENSMUST00000114146ENSMUST00000114147
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LF_0001ENSG00000126903ENST00000263512ENST00000369649ENST00000393586ENST00000393587ENST00000453912CIL_0003LF_0002ENSMUSG00000015290ENSMUST00000015434ENSMUST00000125914ENSMUST00000126117ENSMUST00000155676ENSMUST00000178691ENSMUSG00000032806ENSMUST00000037967ENSMUST00000073067ENSMUST00000114146ENSMUST00000114147
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126903 ENST00000263512 8.153±0.00 3.369±0.00 1.100±0.00 2.221±0.00 10.298±0.00 3.789±3.57 2.537±2.09 6.235±5.55 0.953±0.00 8.152±6.22 5.459±3.21 11.023±11.61 18.765±3.44 12.562±0.00
ENST00000369649 2.471±0.00 2.992±0.00 N/A 0.897±0.00 0.927±0.00 N/A 0.884±0.67 1.517±0.00 1.218±0.00 2.368±1.64 3.360±0.00 6.858±0.00 6.991±0.50 1.223±0.00
ENST00000393586 N/A N/A N/A N/A N/A N/A 0.462±0.00 N/A N/A N/A N/A 4.042±0.00 N/A 0.915±0.00
ENST00000393587 6.692±0.00 7.131±0.00 0.945±0.00 N/A N/A 2.723±1.00 0.143±0.00 N/A N/A N/A N/A 10.052±2.05 12.638±6.26 0.890±0.00
ENST00000453912 N/A N/A N/A 0.560±0.33 2.730±0.00 N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A 1.567±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015290 ENSMUST00000015434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.574±0.00 0.830±0.00
ENSMUST00000125914 N/A N/A N/A 28.486±0.00 N/A N/A N/A N/A N/A N/A N/A 41.637±0.00 49.334±12.86 3.747±0.00
ENSMUST00000126117 N/A N/A N/A 4.711±0.75 11.537±0.00 N/A N/A N/A N/A N/A N/A 15.133±0.52 3.152±0.00 0.993±0.00
ENSMUST00000126191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155676 21.735±1.77 27.411±3.07 23.949±3.59 11.757±4.51 16.913±3.28 18.402±2.48 31.234±1.11 19.599±3.87 13.402±1.08 18.020±0.76 25.345±1.48 21.011±8.66 9.708±4.45 1.793±0.82
ENSMUST00000178691 N/A 9.142±0.75 N/A N/A 6.019±0.08 12.203±1.02 N/A N/A 11.682±4.92 N/A N/A 14.163±0.00 14.796±5.70 3.509±1.61
ENSMUSG00000032806 ENSMUST00000037967 5.341±0.94 7.587±0.66 5.934±1.24 N/A N/A N/A N/A 4.972±0.00 3.416±0.00 N/A N/A N/A 3.991±0.00 1.814±0.55
ENSMUST00000073067 7.150±0.46 N/A N/A N/A 7.766±3.71 7.952±0.68 N/A 6.935±1.05 4.917±0.31 4.694±0.00 N/A N/A 5.407±0.60 2.020±0.45
ENSMUST00000114146 6.603±0.91 14.300±4.23 N/A N/A 8.429±3.36 10.509±3.69 N/A 5.438±0.00 3.932±0.66 10.414±1.72 N/A 19.649±4.82 5.262±0.00 0.164±0.00
ENSMUST00000114147 N/A N/A N/A N/A 8.524±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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