C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015290 Ubl4 10090 - X:74365718-74373218 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015434 Ubl4-005 74367272-74368466 nonsense_mediated_decay
  ENSMUST00000125914 Ubl4-004 74367797-74368503 processed_transcript
  ENSMUST00000126117 Ubl4-002 74365719-74368558 processed_transcript
  ENSMUST00000126191 Ubl4-003 74367743-74368513 retained_intron
  ENSMUST00000140632 Ubl4-006 74367310-74368496 retained_intron
  ENSMUST00000155676 Ubl4-001 74365718-74368673 protein_coding
  ENSMUST00000178691 Ubl4-201 74367465-74373218 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015434ENSMUST00000125914ENSMUST00000126117ENSMUST00000155676ENSMUST00000178691
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.574±0.00 0.830±0.00
ENSMUST00000125914 N/A N/A N/A 28.486±0.00 N/A N/A N/A N/A N/A N/A N/A 41.637±0.00 49.334±12.86 3.747±0.00
ENSMUST00000126117 N/A N/A N/A 4.711±0.75 11.537±0.00 N/A N/A N/A N/A N/A N/A 15.133±0.52 3.152±0.00 0.993±0.00
ENSMUST00000155676 21.735±1.77 27.411±3.07 23.949±3.59 11.757±4.51 16.913±3.28 18.402±2.48 31.234±1.11 19.599±3.87 13.402±1.08 18.020±0.76 25.345±1.48 21.011±8.66 9.708±4.45 1.793±0.82
ENSMUST00000178691 N/A 9.142±0.75 N/A N/A 6.019±0.08 12.203±1.02 N/A N/A 11.682±4.92 N/A N/A 14.163±0.00 14.796±5.70 3.509±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KI CIL_0006KI_0002 CGP X:74351276-74373218
CIL_0003LF CIL_0003LF_0002 CGP X:74365718-74373349

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 ISS cytosol
GO:0006810 IEA transport
GO:0071816 ISS tail-anchored membrane protein insertion into ER membrane
GO:0071818 ISS BAT3 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007359 UBL4A ubiquitin-like 4A protein_coding Danio_rerio
ENSG00000102178 UBL4A ubiquitin-like 4A protein_coding Homo_sapiens

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