C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptotagmin-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102362 SYTL4 9606 - X:100674491-100732123 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263033 SYTL4-002 100675897-100732121 protein_coding
  ENST00000276141 SYTL4-201 100674494-100731534 protein_coding
  ENST00000372981 SYTL4-003 100684696-100732120 protein_coding
  ENST00000372989 SYTL4-001 100674491-100731510 protein_coding
  ENST00000491326 SYTL4-005 100731414-100732123 processed_transcript
  ENST00000491602 SYTL4-004 100674494-100678783 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263033ENST00000276141ENST00000372981ENST00000372989ENST00000491602
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263033 N/A N/A 0.791±0.00 1.368±0.75 N/A 1.628±0.00 N/A 1.344±0.00 1.849±0.00 N/A 0.093±0.00 3.726±0.00 N/A 2.275±0.00
ENST00000276141 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.389±0.00 N/A 7.294±3.76 1.804±0.04 N/A
ENST00000372981 N/A N/A N/A N/A N/A 0.702±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372989 N/A N/A N/A 1.208±0.00 N/A 3.372±0.00 1.067±0.00 1.799±1.19 1.713±0.00 N/A 0.401±0.00 2.736±1.68 1.105±0.00 1.945±0.46
ENST00000491602 27.458±0.00 1.255±0.00 N/A 0.847±0.36 14.215±0.00 6.616±0.00 1.132±0.00 N/A 1.835±0.00 3.235±0.00 0.711±0.00 5.223±4.62 2.823±1.71 3.175±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BB CIL_0007BB_0001 CGP X:100644218-100732123
CIL_0007BC CIL_0007BC_0001 CGP X:100674491-100840932

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005543 ISS phospholipid binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005768 IDA endosome
GO:0005813 IDA centrosome
GO:0005886 IEA plasma membrane
GO:0006886 IEA intracellular protein transport
GO:0006887 IEA exocytosis
GO:0008021 IEA synaptic vesicle
GO:0008270 IEA zinc ion binding
GO:0017137 IEA Rab GTPase binding
GO:0019898 ISS extrinsic component of membrane
GO:0030141 IEA secretory granule
GO:0042043 ISS neurexin family protein binding
GO:0045921 IMP positive regulation of exocytosis
GO:0046676 IEA negative regulation of insulin secretion
GO:0050714 IMP positive regulation of protein secretion
GO:0071985 IMP multivesicular body sorting pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013269 sytl4 synaptotagmin-like 4 protein_coding Danio_rerio
ENSMUSG00000031255 Sytl4 synaptotagmin-like 4 protein_coding Mus_musculus

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