C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263033 SYTL4-002 ENSG00000102362 9606 - X:100675897-100732121 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverMuscleOvaryTestisENST00000263033
Transcript ID Bladder Brain Colon Kidney Liver Muscle Ovary Testis
ENST00000263033 0.791±0.00 1.368±0.75 1.628±0.00 1.344±0.00 1.849±0.00 0.093±0.00 3.726±0.00 2.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BB CIL_0007BB_0001 CGP X:100644218-100732123
CIL_0007BC CIL_0007BC_0001 CGP X:100674491-100840932

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005543 ISS phospholipid binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005768 IDA endosome
GO:0005813 IDA centrosome
GO:0005886 IEA plasma membrane
GO:0006886 IEA intracellular protein transport
GO:0008021 IEA synaptic vesicle
GO:0008270 IEA zinc ion binding
GO:0017137 IEA Rab GTPase binding
GO:0019898 ISS extrinsic component of membrane
GO:0042043 ISS neurexin family protein binding
GO:0045921 IMP positive regulation of exocytosis
GO:0050714 IMP positive regulation of protein secretion
GO:0071985 IMP multivesicular body sorting pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033608 Sytl4-001 protein_coding Mus_musculus 0 2641
ENSMUST00000113297 Sytl4-002 protein_coding Mus_musculus 0 1652
ENSMUST00000113294 Sytl4-003 protein_coding Mus_musculus 0 1650

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