C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptotagmin-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031255 Sytl4 10090 - X:133936385-133981812 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033608 Sytl4-001 133936385-133981812 protein_coding
  ENSMUST00000113294 Sytl4-003 133946448-133981812 protein_coding
  ENSMUST00000113297 Sytl4-002 133936385-133981783 protein_coding
  ENSMUST00000174091 Sytl4-004 133950306-133960990 processed_transcript
  ENSMUST00000174542 Sytl4-005 133952354-133981809 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033608ENSMUST00000113294ENSMUST00000113297ENSMUST00000174542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033608 0.703±0.01 0.522±0.11 0.387±0.10 0.119±0.00 0.154±0.12 0.808±0.25 0.210±0.05 0.272±0.20 0.327±0.10 0.469±0.13 0.172±0.05 2.533±2.04 0.334±0.09 N/A
ENSMUST00000113294 0.455±0.00 0.437±0.22 N/A 0.034±0.00 0.189±0.03 0.476±0.09 0.080±0.02 0.175±0.04 0.147±0.08 0.250±0.03 0.047±0.01 1.887±0.64 0.085±0.00 0.553±0.04
ENSMUST00000113297 0.192±0.01 0.634±0.06 0.526±0.07 0.080±0.05 0.223±0.10 N/A 0.078±0.03 N/A 0.271±0.09 N/A 0.115±0.00 3.974±3.31 0.213±0.12 1.366±0.45
ENSMUST00000174542 N/A 0.881±0.00 N/A 0.725±0.00 N/A N/A N/A N/A 0.412±0.00 N/A 0.215±0.00 N/A 1.053±0.18 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BB CIL_0007BB_0002 CGP X:133908426-133981812
CIL_0007BC CIL_0007BC_0002 CGP X:133936385-134086819

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005543 IDA phospholipid binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005813 IEA centrosome
GO:0006886 IEA intracellular protein transport
GO:0006887 IDA exocytosis
GO:0008270 IEA:NAS zinc ion binding
GO:0017137 IEA Rab GTPase binding
GO:0019898 IDA extrinsic component of membrane
GO:0030141 IDA secretory granule
GO:0042043 IDA neurexin family protein binding
GO:0045921 IEA positive regulation of exocytosis
GO:0046676 IMP negative regulation of insulin secretion
GO:0050714 IEA positive regulation of protein secretion
GO:0071985 IEA multivesicular body sorting pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013269 sytl4 synaptotagmin-like 4 protein_coding Danio_rerio
ENSG00000102362 SYTL4 synaptotagmin-like 4 protein_coding Homo_sapiens

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