C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | SET domain containing 6 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000103037  |
SETD6 | 9606 | + |
16:58515479-58521181  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000219315 |
SETD6-003 | 58515488-58519110 | protein_coding | ||
| ENST00000310682 |
SETD6-001 | 58515479-58519662 | protein_coding | ||
| ENST00000394266 |
SETD6-006 | 58515482-58521181 | protein_coding | ||
| ENST00000418480 |
SETD6-010 | 58515547-58518467 | processed_transcript | ||
| ENST00000422445 |
SETD6-004 | 58515791-58519503 | nonsense_mediated_decay | ||
| ENST00000427443 |
SETD6-002 | 58515496-58519515 | nonsense_mediated_decay | ||
| ENST00000447443 |
SETD6-009 | 58515513-58518872 | protein_coding | ||
| ENST00000463954 |
SETD6-012 | 58517467-58519076 | retained_intron | ||
| ENST00000467320 |
SETD6-011 | 58516132-58517190 | retained_intron | ||
| ENST00000468223 |
SETD6-014 | 58515530-58516217 | retained_intron | ||
| ENST00000470003 |
SETD6-007 | 58515500-58516494 | retained_intron | ||
| ENST00000491587 |
SETD6-013 | 58518186-58518898 | retained_intron | ||
| ENST00000492050 |
SETD6-008 | 58515512-58516527 | retained_intron | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004IY | CIL_0004IY_0001 | CGP | 16:58462846-58521181 |
| CIL_0004IZ | CIL_0004IZ_0001 | CGP | 16:58515479-58629886 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0016279 | IDA | protein-lysine N-methyltransferase activity |
| GO:0018026 | IDA | peptidyl-lysine monomethylation |
| GO:0032088 | IMP | negative regulation of NF-kappaB transcription factor activity |
| GO:0050727 | IMP | regulation of inflammatory response |
| GO:0051059 | IPI | NF-kappaB binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000043986
|
setd6 | SET domain containing 6 | protein_coding | Danio_rerio | |
|
ENSMUSG00000031671
|
Setd6 | SET domain containing 6 | protein_coding | Mus_musculus | |
