C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004IZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103037-ENSG00000125107 CGP 9606 16:58515479-58629886
GeneTranscriptPositionBiotype
ENSG00000125107 (CNOT1)
CCR4-NOT transcription complex, subunit 1 		ENST00000245138 (CNOT1-201) 58519954-58532397 protein_coding
ENST00000317147 (CNOT1-001) 58519951-58629886 protein_coding
ENST00000441024 (CNOT1-002) 58543327-58629838 protein_coding
ENST00000562046 (CNOT1-022) 58551790-58558490 protein_coding
ENST00000563130 (CNOT1-004) 58520684-58533165 retained_intron
ENST00000563283 (CNOT1-012) 58538158-58540066 retained_intron
ENST00000564557 (CNOT1-010) 58588821-58629825 protein_coding
ENST00000565605 (CNOT1-020) 58574717-58629832 nonsense_mediated_decay
ENST00000565697 (CNOT1-007) 58599261-58624786 protein_coding
ENST00000566240 (CNOT1-018) 58542230-58543802 nonsense_mediated_decay
ENST00000567133 (CNOT1-017) 58543607-58546702 protein_coding
ENST00000567188 (CNOT1-005) 58520706-58629832 nonsense_mediated_decay
ENST00000567285 (CNOT1-016) 58546465-58551766 protein_coding
ENST00000568158 (CNOT1-009) 58599374-58629815 processed_transcript
ENST00000568917 (CNOT1-019) 58531958-58539878 protein_coding
ENST00000569020 (CNOT1-008) 58599263-58629885 protein_coding
ENST00000569240 (CNOT1-003) 58520695-58629834 protein_coding
ENST00000569263 (CNOT1-006) 58623226-58629847 processed_transcript
ENST00000569732 (CNOT1-015) 58551603-58558617 processed_transcript
ENST00000569882 (CNOT1-023) 58555784-58575063 protein_coding
ENST00000569916 (CNOT1-011) 58599010-58629824 retained_intron
ENST00000569924 (CNOT1-014) 58521015-58525381 retained_intron
ENST00000570139 (CNOT1-013) 58528614-58530668 retained_intron
ENSG00000206952 (SNORA76A)
small nucleolar RNA, H/ACA box 76A 		ENST00000384225 (SNORA76A-201) 58559796-58559929 snoRNA
ENSG00000207493 (SNORA46)
small nucleolar RNA, H/ACA box 46 		ENST00000384762 (SNORA46-201) 58548499-58548633 snoRNA
ENSG00000260865 (CTA-331F8.1)
 ENST00000566916 (CTA-331F8.1-001) 58597589-58597945 transcribed_processed_pseudogene
ENSG00000279816 (AC010287.1)
 ENST00000623879 (AC010287.1-201) 58554337-58554935 protein_coding
CIL_0004IZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031671-ENSMUSG00000036550 CGP 10090 8:95715915-95807462
GeneTranscriptPositionBiotype
ENSMUSG00000031671 (Setd6)
SET domain containing 6 		ENSMUST00000034096 (Setd6-001) 95715932-95719010 protein_coding
ENSMUST00000126888 (Setd6-005) 95716162-95717237 processed_transcript
ENSMUST00000141900 (Setd6-002) 95716611-95718519 processed_transcript
ENSMUST00000148727 (Setd6-004) 95715915-95716781 processed_transcript
ENSMUST00000154052 (Setd6-003) 95716620-95718066 processed_transcript
ENSMUST00000154593 (Setd6-006) 95717009-95718871 processed_transcript
ENSMUSG00000036550 (Cnot1)
CCR4-NOT transcription complex, subunit 1 		ENSMUST00000068452 (Cnot1-201) 95719451-95807462 protein_coding
ENSMUST00000098473 (Cnot1-202) 95719451-95807462 protein_coding
ENSMUSG00000065089 (Gm26493)
predicted gene, 26493 		ENSMUST00000083155 (Gm26493-201) 95746060-95746195 snoRNA
ENSMUSG00000065211 (Gm26265)
predicted gene, 26265 		ENSMUST00000083277 (Gm26265-201) 95756950-95757084 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IZ_0001ENSG00000125107ENST00000245138ENST00000317147ENST00000441024ENST00000562046ENST00000563130ENST00000563283ENST00000564557ENST00000565605ENST00000565697ENST00000566240ENST00000567133ENST00000567188ENST00000567285ENST00000568158ENST00000568917ENST00000569020ENST00000569240ENST00000569263ENST00000569732ENST00000569882ENST00000569916ENST00000569924ENST00000570139ENSG00000206952ENST00000384225ENSG00000207493ENST00000384762ENSG00000260865ENST00000566916ENSG00000279816ENST00000623879CIL_0004IZ_0002ENSMUSG00000031671ENSMUST00000034096ENSMUST00000126888ENSMUST00000141900ENSMUST00000148727ENSMUST00000154052ENSMUST00000154593ENSMUSG00000036550ENSMUST00000068452ENSMUST00000098473ENSMUSG00000065089ENSMUST00000083155ENSMUSG00000065211ENSMUST00000083277
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IZ_0001ENSG00000125107ENST00000245138ENST00000317147ENST00000441024ENST00000568917ENST00000569240ENSG00000206952ENST00000384225ENSG00000207493ENST00000384762ENSG00000260865ENST00000566916ENSG00000279816ENST00000623879CIL_0004IZ_0002ENSMUSG00000031671ENSMUST00000034096ENSMUST00000126888ENSMUST00000141900ENSMUST00000154593ENSMUSG00000036550ENSMUST00000068452ENSMUST00000098473ENSMUSG00000065089ENSMUST00000083155ENSMUSG00000065211ENSMUST00000083277
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125107 ENST00000245138 7.708±0.00 16.678±0.00 N/A 6.105±1.25 13.309±0.00 15.776±0.00 11.392±0.00 22.174±0.00 7.023±0.00 16.222±0.00 14.829±0.00 17.226±0.45 15.666±3.23 44.067±0.00
ENST00000317147 3.330±0.00 N/A N/A 3.538±0.00 5.938±0.00 5.887±0.00 1.245±0.00 N/A 2.156±0.00 3.986±0.00 2.320±0.00 5.644±0.88 N/A 21.996±0.00
ENST00000441024 N/A N/A 8.800±0.00 2.801±0.00 7.656±0.00 6.622±0.00 1.559±0.00 6.670±0.00 4.883±0.00 5.766±0.00 N/A 4.182±0.00 N/A N/A
ENST00000562046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568917 12.667±0.00 N/A N/A N/A 15.272±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 49.668±0.00
ENST00000569020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569240 5.958±0.00 5.977±0.00 N/A 4.610±0.00 6.435±0.62 8.081±0.47 5.805±2.68 6.702±1.18 5.750±2.02 8.630±0.76 8.767±4.28 6.965±1.71 8.590±2.36 36.994±10.24
ENST00000569263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206952 ENST00000384225 0.585±0.00 1.904±0.00 N/A 20.180±0.00 45.723±0.00 55.837±0.00 72.037±0.00 39.901±0.00 17.482±0.00 64.211±64.08 N/A 30.421±29.41 N/A 0.496±0.00
ENSG00000207493 ENST00000384762 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.113±0.00 111.087±0.00 N/A 1.482±0.00 0.462±0.00
ENSG00000260865 ENST00000566916 N/A 0.110±0.00 N/A N/A N/A 0.351±0.14 0.102±0.00 0.110±0.00 N/A 2.024±0.00 N/A 1.621±1.45 N/A N/A
ENSG00000279816 ENST00000623879 0.493±0.00 1.131±0.00 N/A 0.516±0.00 0.476±0.00 1.453±0.45 0.260±0.00 0.399±0.00 0.387±0.14 0.334±0.18 0.621±0.56 0.172±0.00 0.078±0.02 0.243±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031671 ENSMUST00000034096 2.939±0.72 13.060±2.59 5.822±0.45 6.634±3.09 3.027±2.33 4.402±1.75 2.044±0.35 4.016±0.41 4.517±2.05 3.669±0.39 4.279±0.50 5.173±2.52 13.526±12.74 1.051±0.49
ENSMUST00000126888 2.220±0.90 N/A 2.999±0.45 2.218±0.00 N/A N/A 1.548±0.00 1.219±0.00 1.846±0.00 2.516±0.00 N/A 6.333±0.00 7.513±0.00 0.903±0.00
ENSMUST00000141900 N/A N/A N/A 14.554±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.882±0.00
ENSMUST00000148727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154593 N/A N/A 2.909±0.42 2.906±0.49 N/A N/A 1.219±0.00 N/A 3.938±1.90 N/A 1.839±0.35 9.435±4.33 4.226±0.88 2.121±1.47
ENSMUSG00000036550 ENSMUST00000068452 N/A N/A N/A 2.439±0.58 N/A 3.448±0.00 N/A N/A N/A N/A N/A 3.996±2.03 4.919±0.40 N/A
ENSMUST00000098473 4.606±0.95 2.704±1.12 4.790±0.96 8.028±6.20 5.226±1.27 5.945±3.10 3.010±0.66 5.142±1.67 4.371±2.17 3.871±0.95 3.552±1.70 8.104±6.33 16.131±5.69 12.543±3.55
ENSMUSG00000065089 ENSMUST00000083155 618.020±0.00 N/A 21.992±0.00 22.243±14.30 N/A N/A N/A N/A 8.097±0.00 N/A 1.943±0.00 17.719±11.43 8.347±2.81 N/A
ENSMUSG00000065211 ENSMUST00000083277 N/A N/A 9.892±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.965±0.00 N/A N/A

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