C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SET domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422445 SETD6-004 ENSG00000103037 9606 + 16:58515791-58519503 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IY CIL_0004IY_0001 CGP 16:58462846-58521181
CIL_0004IZ CIL_0004IZ_0001 CGP 16:58515479-58629886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034096 Setd6-001 protein_coding Mus_musculus 0 651
ENSMUST00000126888 Setd6-005 processed_transcript Mus_musculus 0 597
ENSMUST00000154593 Setd6-006 processed_transcript Mus_musculus 0 483
ENSMUST00000141900 Setd6-002 processed_transcript Mus_musculus 0 226
ENSMUST00000120478 Gm5405-001 processed_pseudogene Mus_musculus 5e-38 163

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