C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: component of oligomeric golgi complex 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103051 COG4 9606 - 16:70480568-70523565 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323786 COG4-001 70480569-70523565 protein_coding
  ENST00000393612 COG4-201 70480572-70523554 protein_coding
  ENST00000482252 COG4-002 70480574-70523531 nonsense_mediated_decay
  ENST00000524584 COG4-007 70512374-70523518 nonsense_mediated_decay
  ENST00000526700 COG4-005 70480578-70508757 retained_intron
  ENST00000530160 COG4-008 70512319-70523554 nonsense_mediated_decay
  ENST00000530314 COG4-003 70480571-70523539 retained_intron
  ENST00000534772 COG4-006 70512273-70523200 protein_coding
  ENST00000562200 COG4-015 70509872-70523540 retained_intron
  ENST00000564315 COG4-018 70482380-70496372 retained_intron
  ENST00000564415 COG4-012 70480568-70523558 nonsense_mediated_decay
  ENST00000564653 COG4-014 70512267-70523550 protein_coding
  ENST00000565715 COG4-019 70480867-70482794 protein_coding
  ENST00000567244 COG4-016 70497973-70501597 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323786ENST00000393612ENST00000526700ENST00000530314ENST00000562200ENST00000564415ENST00000565715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323786 10.340±0.00 10.201±0.00 N/A 7.276±4.27 16.282±0.00 12.814±0.00 6.864±5.32 11.216±0.00 9.535±0.00 4.072±3.36 15.041±10.27 14.734±3.02 18.463±3.12 13.769±5.55
ENST00000393612 N/A N/A N/A N/A 1.987±0.00 N/A N/A N/A 0.591±0.00 N/A N/A N/A N/A N/A
ENST00000526700 N/A N/A N/A N/A N/A N/A N/A 3.165±0.00 N/A N/A N/A 3.548±0.00 N/A N/A
ENST00000530314 N/A N/A 0.429±0.00 N/A N/A N/A 0.371±0.00 2.321±0.00 N/A N/A 1.180±0.00 1.704±0.00 N/A N/A
ENST00000562200 N/A N/A 3.519±0.00 3.574±0.00 5.303±0.00 7.785±0.00 4.651±0.00 N/A 6.402±0.00 3.844±0.00 10.412±0.00 5.311±0.00 N/A N/A
ENST00000564415 N/A N/A N/A N/A 0.714±0.00 N/A N/A N/A N/A 1.317±0.00 N/A N/A N/A N/A
ENST00000565715 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.057±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006890 IMP retrograde vesicle-mediated transport, Golgi to ER
GO:0007030 IMP Golgi organization
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017119 IDA Golgi transport complex
GO:0048213 IMP Golgi vesicle prefusion complex stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054264 cog4 component of oligomeric golgi complex 4 protein_coding Danio_rerio
ENSMUSG00000031753 Cog4 component of oligomeric golgi complex 4 protein_coding Mus_musculus

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