C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: component of oligomeric golgi complex 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031753 Cog4 10090 + 8:110846600-110882227 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034203 Cog4-001 110847034-110882227 protein_coding
  ENSMUST00000165867 Cog4-005 110846600-110881895 protein_coding
  ENSMUST00000172497 Cog4-012 110880988-110881756 retained_intron
  ENSMUST00000172542 Cog4-002 110859859-110881865 nonsense_mediated_decay
  ENSMUST00000172668 Cog4-010 110847034-110852345 protein_coding
  ENSMUST00000172897 Cog4-007 110847051-110853829 nonsense_mediated_decay
  ENSMUST00000173501 Cog4-004 110859704-110868421 retained_intron
  ENSMUST00000173794 Cog4-013 110863100-110866654 retained_intron
  ENSMUST00000174165 Cog4-008 110847024-110853728 nonsense_mediated_decay
  ENSMUST00000174398 Cog4-003 110847054-110881865 protein_coding
  ENSMUST00000174679 Cog4-009 110849871-110882221 protein_coding
  ENSMUST00000174702 Cog4-006 110847039-110850273 retained_intron
  ENSMUST00000174723 Cog4-011 110847051-110853783 nonsense_mediated_decay
  ENSMUST00000174800 Cog4-014 110847051-110853792 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034203ENSMUST00000165867
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034203 27.209±5.42 13.509±4.45 16.190±1.13 14.359±2.42 18.314±4.86 12.161±3.87 14.576±2.01 16.659±3.18 11.333±1.62 12.101±0.53 19.359±0.61 18.298±6.48 20.824±3.16 24.495±3.15
ENSMUST00000165867 N/A N/A N/A 10.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.804±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CK CIL_0000CK_0002 CGP 8:110741829-110846803

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0006890 IEA retrograde vesicle-mediated transport, Golgi to ER
GO:0007030 IEA Golgi organization
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017119 IEA Golgi transport complex
GO:0048213 IEA Golgi vesicle prefusion complex stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054264 cog4 component of oligomeric golgi complex 4 protein_coding Danio_rerio
ENSG00000103051 COG4 component of oligomeric golgi complex 4 protein_coding Homo_sapiens

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