C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: epithelial splicing regulatory protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103067 ESRP2 9606 - 16:68229111-68238102 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251366 ESRP2-002 68229117-68236070 retained_intron
  ENST00000473183 ESRP2-001 68229126-68236584 protein_coding
  ENST00000562567 ESRP2-010 68233172-68235003 retained_intron
  ENST00000562724 ESRP2-007 68233816-68238102 protein_coding
  ENST00000562738 ESRP2-011 68232541-68234170 retained_intron
  ENST00000563159 ESRP2-012 68233338-68234164 retained_intron
  ENST00000564382 ESRP2-006 68233357-68238067 protein_coding
  ENST00000564465 ESRP2-008 68233338-68235708 retained_intron
  ENST00000565213 ESRP2-014 68231967-68232506 retained_intron
  ENST00000565858 ESRP2-004 68229111-68236132 protein_coding
  ENST00000566774 ESRP2-005 68229402-68232815 nonsense_mediated_decay
  ENST00000569964 ESRP2-009 68233199-68235749 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungENST00000473183ENST00000565858
Transcript ID Breast Colon Kidney Liver Lung
ENST00000473183 N/A N/A 6.696±0.00 N/A N/A
ENST00000565858 3.799±0.00 3.639±0.00 8.447±0.00 28.110±0.00 9.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006A CIL_00006A_0001 CGP 16:68021274-68229259
CIL_00055Z CIL_00055Z_0001 CGP 16:68084751-68238102
CIL_00024G CIL_00024G_0001 CGP 16:68229111-68261062

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003729 IDA mRNA binding
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043484 IDA regulation of RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018814 esrp2 epithelial splicing regulatory protein 2 protein_coding Danio_rerio
ENSMUSG00000084128 Esrp2 epithelial splicing regulatory protein 2 protein_coding Mus_musculus

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