C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: epithelial splicing regulatory protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000084128 Esrp2 10090 - 8:106130319-106136974 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115979 Esrp2-001 106130319-106136974 protein_coding
  ENSMUST00000125955 Esrp2-004 106133959-106134941 retained_intron
  ENSMUST00000131020 Esrp2-006 106132815-106134724 retained_intron
  ENSMUST00000139319 Esrp2-007 106133528-106134128 retained_intron
  ENSMUST00000139559 Esrp2-009 106133268-106134128 retained_intron
  ENSMUST00000142050 Esrp2-008 106132728-106133075 processed_transcript
  ENSMUST00000146940 Esrp2-005 106132225-106136813 protein_coding
  ENSMUST00000150527 Esrp2-003 106133802-106135096 retained_intron
  ENSMUST00000155164 Esrp2-002 106136183-106136685 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000115979ENSMUST00000146940
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000115979 3.148±0.49 1.638±0.00 21.066±0.43 7.069±0.36 16.469±2.65 6.914±2.23 11.347±4.87 14.131±0.72 6.795±0.65 13.360±6.25
ENSMUST00000146940 N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.301±2.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006A CIL_00006A_0002 CGP 8:106009621-106130537
CIL_00055Z CIL_00055Z_0002 CGP 8:106059603-106136974
CIL_00024G CIL_00024G_0002 CGP 8:106130319-106164713

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003729 ISS mRNA binding
GO:0005634 ISS nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043484 ISS regulation of RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018814 esrp2 epithelial splicing regulatory protein 2 protein_coding Danio_rerio
ENSG00000103067 ESRP2 epithelial splicing regulatory protein 2 protein_coding Homo_sapiens

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