C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rhomboid, veinlet-like 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103269 RHBDL1 9606 + 16:675666-678268 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219551 RHBDL1-001 676075-678268 protein_coding
  ENST00000352681 RHBDL1-002 675666-678268 protein_coding
  ENST00000450775 RHBDL1-003 675722-678267 retained_intron
  ENST00000561556 RHBDL1-005 675683-677843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000219551ENST00000352681ENST00000450775ENST00000561556
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000219551 N/A N/A 1.804±1.03 0.160±0.00 0.114±0.00 N/A 0.196±0.00 N/A N/A 0.485±0.18 0.219±0.06 0.245±0.00
ENST00000352681 0.048±0.00 0.448±0.00 1.569±0.03 0.778±0.00 0.335±0.00 0.893±0.00 0.479±0.00 N/A 0.229±0.00 0.500±0.35 0.127±0.00 1.157±0.33
ENST00000450775 N/A N/A 0.986±0.00 N/A N/A N/A 0.366±0.00 N/A N/A 0.220±0.02 0.169±0.00 N/A
ENST00000561556 N/A N/A N/A N/A N/A N/A 0.202±0.00 0.085±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GN CIL_0003GN_0001 CGP 16:668086-678268

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005887 TAS integral component of plasma membrane
GO:0006508 IEA proteolysis
GO:0007165 TAS signal transduction
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087040 rhbdl1 rhomboid, veinlet-like 1 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000025735 Rhbdl1 rhomboid, veinlet-like 1 (Drosophila) protein_coding Mus_musculus

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