C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003GN_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000140983-ENSG00000103269 | CGP | 9606 | 16:668086-678268  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000103269  (RHBDL1)rhomboid, veinlet-like 1 (Drosophila) |
ENST00000219551 (RHBDL1-001)
|
676075-678268 | protein_coding | |
|
ENST00000352681 (RHBDL1-002)
|
675666-678268 | protein_coding | ||
|
ENST00000450775 (RHBDL1-003)
|
675722-678267 | retained_intron | ||
|
ENST00000561556 (RHBDL1-005)
|
675683-677843 | protein_coding | ||
|
ENSG00000140983 (RHOT2) ras homolog family member T2 |
ENST00000315082 (RHOT2-001)
|
668086-674174 | protein_coding | |
|
ENST00000561711 (RHOT2-011)
|
671917-672817 | retained_intron | ||
|
ENST00000561929 (RHOT2-014)
|
668209-670940 | protein_coding | ||
|
ENST00000561983 (RHOT2-018)
|
668105-671199 | nonsense_mediated_decay | ||
|
ENST00000562333 (RHOT2-017)
|
668187-671993 | nonsense_mediated_decay | ||
|
ENST00000562598 (RHOT2-016)
|
668182-670538 | retained_intron | ||
|
ENST00000562708 (RHOT2-008)
|
668112-670525 | retained_intron | ||
|
ENST00000562957 (RHOT2-019)
|
672792-673537 | retained_intron | ||
|
ENST00000563134 (RHOT2-024)
|
668106-670993 | protein_coding | ||
|
ENST00000563637 (RHOT2-013)
|
668151-671934 | nonsense_mediated_decay | ||
|
ENST00000563776 (RHOT2-027)
|
668105-671162 | retained_intron | ||
|
ENST00000564659 (RHOT2-023)
|
672668-673972 | retained_intron | ||
|
ENST00000565004 (RHOT2-025)
|
671082-673057 | retained_intron | ||
|
ENST00000566214 (RHOT2-007)
|
668151-670773 | nonsense_mediated_decay | ||
|
ENST00000566965 (RHOT2-006)
|
668560-671785 | retained_intron | ||
|
ENST00000567017 (RHOT2-005)
|
668162-671933 | retained_intron | ||
|
ENST00000567589 (RHOT2-026)
|
670528-671312 | retained_intron | ||
|
ENST00000568636 (RHOT2-004)
|
668658-674125 | retained_intron | ||
|
ENST00000568950 (RHOT2-020)
|
668178-672297 | retained_intron | ||
|
ENST00000569197 (RHOT2-021)
|
672749-674165 | protein_coding | ||
|
ENST00000569358 (RHOT2-022)
|
670455-673059 | retained_intron | ||
|
ENST00000569675 (RHOT2-002)
|
668135-674174 | retained_intron | ||
|
ENST00000569706 (RHOT2-010)
|
668132-668881 | retained_intron | ||
|
ENST00000569943 (RHOT2-012)
|
668353-670959 | processed_transcript | ||
|
ENST00000570092 (RHOT2-009)
|
668124-670507 | retained_intron | ||
|
ENST00000570280 (RHOT2-015)
|
668153-671131 | nonsense_mediated_decay | ||
|
ENST00000602564 (RHOT2-028)
|
668180-673308 | retained_intron | ||
| CIL_0003GN_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000025735-ENSMUSG00000093593 | CGP | 10090 | 17:25834465-25841763 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000025733 (Rhot2) ras homolog gene family, member T2 |
ENSMUST00000043897 (Rhot2-001)
|
25838457-25844851 | protein_coding | |
|
ENSMUST00000175790 (Rhot2-007)
|
25841560-25844306 | retained_intron | ||
|
ENSMUST00000175869 (Rhot2-017)
|
25842256-25844569 | processed_transcript | ||
|
ENSMUST00000176247 (Rhot2-004)
|
25843775-25844530 | retained_intron | ||
|
ENSMUST00000176522 (Rhot2-013)
|
25839274-25840599 | retained_intron | ||
|
ENSMUST00000176583 (Rhot2-008)
|
25841568-25843143 | retained_intron | ||
|
ENSMUST00000176591 (Rhot2-015)
|
25841760-25844417 | protein_coding | ||
|
ENSMUST00000176602 (Rhot2-009)
|
25841386-25842106 | retained_intron | ||
|
ENSMUST00000176604 (Rhot2-012)
|
25841605-25844318 | retained_intron | ||
|
ENSMUST00000176709 (Rhot2-016)
|
25842252-25844525 | protein_coding | ||
|
ENSMUST00000176857 (Rhot2-010)
|
25841337-25843137 | retained_intron | ||
|
ENSMUST00000176882 (Rhot2-014)
|
25840054-25841662 | processed_transcript | ||
|
ENSMUST00000177062 (Rhot2-011)
|
25841256-25842054 | retained_intron | ||
|
ENSMUST00000177122 (Rhot2-003)
|
25838838-25841148 | retained_intron | ||
|
ENSMUST00000177315 (Rhot2-005)
|
25842382-25844542 | processed_transcript | ||
|
ENSMUST00000177347 (Rhot2-006)
|
25842096-25844446 | retained_intron | ||
|
ENSMUST00000177470 (Rhot2-002)
|
25838840-25844463 | retained_intron | ||
|
ENSMUSG00000025735 (Rhbdl1) rhomboid, veinlet-like 1 (Drosophila) |
ENSMUST00000026831 (Rhbdl1-001)
|
25834465-25837295 | protein_coding | |
|
ENSMUST00000183929 (Rhbdl1-003)
|
25834602-25837082 | protein_coding | ||
|
ENSMUST00000184865 (Rhbdl1-002)
|
25835773-25837251 | protein_coding | ||
|
ENSMUSG00000093593 (Gm20683) predicted gene 20683 |
ENSMUST00000176751 (Gm20683-001)
|
25834465-25841763 | nonsense_mediated_decay | |
Expression Patterns
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