C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: rhomboid, veinlet-like 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561556 RHBDL1-005 ENSG00000103269 9606 + 16:675683-677843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverENST00000561556
Transcript ID Kidney Liver
ENST00000561556 0.202±0.00 0.085±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GN CIL_0003GN_0001 CGP 16:668086-678268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0006508 IEA proteolysis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026831 Rhbdl1-001 protein_coding Mus_musculus 0 608
ENSMUST00000176751 Gm20683-001 nonsense_mediated_decay Mus_musculus 0 538
ENSMUST00000183929 Rhbdl1-003 protein_coding Mus_musculus 0 486
ENSMUST00000184865 Rhbdl1-002 protein_coding Mus_musculus 1e-36 158

Loading