C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 16 open reading frame 62
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103544 C16orf62 9606 + 16:19555240-19706793 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251143 C16orf62-201 19555415-19701163 protein_coding
  ENST00000417362 C16orf62-024 19555720-19700689 protein_coding
  ENST00000438132 C16orf62-003 19555415-19701124 protein_coding
  ENST00000448695 C16orf62-202 19578724-19701126 protein_coding
  ENST00000513947 C16orf62-004 19555726-19618081 protein_coding
  ENST00000535164 C16orf62-011 19601603-19616740 retained_intron
  ENST00000537186 C16orf62-007 19555720-19573163 nonsense_mediated_decay
  ENST00000538552 C16orf62-014 19607776-19626202 protein_coding
  ENST00000539322 C16orf62-005 19555415-19609022 nonsense_mediated_decay
  ENST00000539705 C16orf62-012 19601611-19627802 retained_intron
  ENST00000540101 C16orf62-023 19607789-19616191 processed_transcript
  ENST00000540240 C16orf62-010 19607778-19608726 retained_intron
  ENST00000541153 C16orf62-013 19601623-19616809 retained_intron
  ENST00000542027 C16orf62-017 19691456-19706793 protein_coding
  ENST00000542263 C16orf62-001 19555416-19700687 protein_coding
  ENST00000543152 C16orf62-002 19578724-19701126 protein_coding
  ENST00000543460 C16orf62-008 19555720-19573380 retained_intron
  ENST00000544275 C16orf62-016 19647847-19652691 processed_transcript
  ENST00000544670 C16orf62-006 19555240-19579129 protein_coding
  ENST00000546175 C16orf62-015 19591823-19610543 retained_intron
  ENST00000562446 C16orf62-018 19579399-19581621 processed_transcript
  ENST00000563649 C16orf62-022 19575098-19582085 protein_coding
  ENST00000566850 C16orf62-021 19699376-19701120 retained_intron
  ENST00000567245 C16orf62-020 19555726-19581608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000417362
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000417362 14.703±0.00 16.958±0.00 6.419±0.00 7.170±0.00 11.726±8.87 5.989±3.02 4.677±3.00 11.535±5.96 4.047±0.12 8.970±3.03 12.979±0.00 14.463±8.21 18.801±1.12 27.966±2.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MW CIL_0006MW_0001 CGP 16:19523811-19706793
CIL_00054B CIL_00054B_0001 CGP 16:19555240-19718235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020041 C12H16orf62 chromosome 16 open reading frame 62 protein_coding Danio_rerio
ENSMUSG00000030982 9030624J02Rik RIKEN cDNA 9030624J02 gene protein_coding Mus_musculus

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