C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 16 open reading frame 62
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417362 C16orf62-024 ENSG00000103544 9606 + 16:19555720-19700689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000417362
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000417362 14.703±0.00 16.958±0.00 6.419±0.00 7.170±0.00 11.726±8.87 5.989±3.02 4.677±3.00 11.535±5.96 4.047±0.12 8.970±3.03 12.979±0.00 14.463±8.21 18.801±1.12 27.966±2.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MW CIL_0006MW_0001 CGP 16:19523811-19706793
CIL_00054B CIL_00054B_0001 CGP 16:19555240-19718235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059390 9030624J02Rik-001 protein_coding Mus_musculus 0 3293
ENSMUST00000033280 9030624J02Rik-004 protein_coding Mus_musculus 0 2518
ENSMUST00000106553 9030624J02Rik-006 protein_coding Mus_musculus 0 2001
ENSMUST00000129334 9030624J02Rik-005 processed_transcript Mus_musculus 0 1321
ENSMUST00000106552 9030624J02Rik-007 protein_coding Mus_musculus 0 1129
ENSMUST00000176197 9030624J02Rik-014 retained_intron Mus_musculus 0 778
ENSMUST00000175952 9030624J02Rik-013 processed_transcript Mus_musculus 0 749
ENSMUST00000175922 9030624J02Rik-003 protein_coding Mus_musculus 0 739
ENSMUST00000136623 9030624J02Rik-009 retained_intron Mus_musculus 0 520
ENSMUST00000149749 9030624J02Rik-010 protein_coding Mus_musculus 0 462

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