C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006MW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103540-ENSG00000103544 CGP 9606 16:19523811-19706793
GeneTranscriptPositionBiotype
ENSG00000103540 (CCP110)
centriolar coiled coil protein 110kDa
ENST00000381396 (CCP110-002) 19523857-19553408 protein_coding
ENST00000396208 (CCP110-201) 19527836-19553400 protein_coding
ENST00000396212 (CCP110-001) 19523811-19553408 protein_coding
ENST00000561888 (CCP110-009) 19527921-19536197 protein_coding
ENST00000562083 (CCP110-004) 19523961-19542066 nonsense_mediated_decay
ENST00000562616 (CCP110-006) 19546849-19551622 retained_intron
ENST00000565376 (CCP110-008) 19523939-19528031 protein_coding
ENST00000566523 (CCP110-005) 19545142-19546565 retained_intron
ENST00000567451 (CCP110-007) 19547732-19551477 retained_intron
ENST00000569190 (CCP110-003) 19523879-19527169 retained_intron
ENST00000573412 (CCP110-010) 19523942-19525799 processed_transcript
ENSG00000103550 (KNOP1)
lysine-rich nucleolar protein 1
ENST00000219837 (KNOP1-001) 19701934-19718234 protein_coding
ENST00000564480 (KNOP1-002) 19714799-19718131 protein_coding
ENST00000565844 (KNOP1-004) 19710260-19718235 retained_intron
ENST00000567367 (KNOP1-003) 19707165-19714577 protein_coding
ENST00000568230 (KNOP1-005) 19706356-19712091 protein_coding
ENSG00000261312 (AC002550.5)
ENST00000565916 (AC002550.5-001) 19706351-19715383 antisense
ENSG00000276571 (AC002550.6)
ENST00000621246 (AC002550.6-001) 19694035-19694428 antisense
CIL_0006MW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033904-ENSMUSG00000030982 CGP 10090 7:118712552-118842966
GeneTranscriptPositionBiotype
ENSMUSG00000030980 (Knop1)
lysine rich nucleolar protein 1
ENSMUST00000033277 (Knop1-001) 118845760-118856254 protein_coding
ENSMUST00000063607 (Knop1-002) 118842237-118856001 protein_coding
ENSMUST00000106549 (Knop1-004) 118845501-118855602 protein_coding
ENSMUST00000106550 (Knop1-201) 118842222-118855998 protein_coding
ENSMUST00000116280 (Knop1-202) 118842222-118855998 protein_coding
ENSMUST00000126792 (Knop1-005) 118843790-118855684 protein_coding
ENSMUST00000152309 (Knop1-003) 118852763-118854289 protein_coding
ENSMUSG00000030982 (9030624J02Rik)
RIKEN cDNA 9030624J02 gene
ENSMUST00000033280 (9030624J02Rik-004) 118764124-118841487 protein_coding
ENSMUST00000059390 (9030624J02Rik-001) 118740226-118842966 protein_coding
ENSMUST00000106552 (9030624J02Rik-007) 118740747-118841479 protein_coding
ENSMUST00000106553 (9030624J02Rik-006) 118740747-118841489 protein_coding
ENSMUST00000129334 (9030624J02Rik-005) 118740732-118784055 processed_transcript
ENSMUST00000131162 (9030624J02Rik-011) 118821623-118826428 retained_intron
ENSMUST00000136623 (9030624J02Rik-009) 118748197-118766544 retained_intron
ENSMUST00000146350 (9030624J02Rik-008) 118752663-118754219 retained_intron
ENSMUST00000148586 (9030624J02Rik-002) 118740749-118747965 retained_intron
ENSMUST00000149749 (9030624J02Rik-010) 118794577-118826204 protein_coding
ENSMUST00000175730 (9030624J02Rik-012) 118806832-118813537 retained_intron
ENSMUST00000175922 (9030624J02Rik-003) 118740747-118762146 protein_coding
ENSMUST00000175952 (9030624J02Rik-013) 118824575-118841299 processed_transcript
ENSMUST00000176197 (9030624J02Rik-014) 118804183-118833991 retained_intron
ENSMUSG00000033904 (Ccp110)
centriolar coiled coil protein 110
ENSMUST00000038650 (Ccp110-201) 118715374-118737021 protein_coding
ENSMUST00000106557 (Ccp110-001) 118712552-118737024 protein_coding
ENSMUST00000123178 (Ccp110-002) 118721615-118737016 retained_intron
ENSMUST00000140831 (Ccp110-004) 118730251-118732462 retained_intron
ENSMUST00000149056 (Ccp110-003) 118725965-118737024 retained_intron
ENSMUSG00000077667 (Gm26147)
predicted gene, 26147
ENSMUST00000104479 (Gm26147-201) 118832565-118832678 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MW_0001ENSG00000103540ENST00000381396ENST00000396208ENST00000396212ENST00000561888ENST00000562083ENST00000562616ENST00000565376ENST00000566523ENST00000567451ENST00000569190ENST00000573412ENSG00000103550ENST00000219837ENST00000564480ENST00000565844ENST00000567367ENST00000568230ENSG00000261312ENST00000565916ENSG00000276571ENST00000621246CIL_0006MW_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MW_0001ENSG00000103540ENST00000381396ENST00000396208ENST00000396212ENSG00000103550ENST00000219837ENST00000565844ENSG00000261312ENST00000565916ENSG00000276571ENST00000621246CIL_0006MW_0002ENSMUSG00000030980ENSMUST00000033277ENSMUST00000063607ENSMUST00000106549ENSMUST00000106550ENSMUST00000116280ENSMUSG00000030982ENSMUST00000033280ENSMUST00000106552ENSMUST00000106553ENSMUST00000175952ENSMUSG00000033904ENSMUST00000038650ENSMUST00000106557ENSMUST00000123178ENSMUST00000149056ENSMUSG00000077667ENSMUST00000104479
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103540 ENST00000381396 0.928±0.00 1.245±0.00 N/A 3.420±2.65 1.123±0.00 0.441±0.12 0.345±0.00 1.010±0.00 0.775±0.00 0.719±0.00 0.612±0.00 1.125±0.70 0.456±0.00 5.370±0.00
ENST00000396208 0.992±0.00 N/A 0.704±0.00 2.270±0.00 0.411±0.00 1.784±0.00 1.587±0.00 0.628±0.00 0.379±0.00 N/A 0.559±0.00 0.839±0.21 0.771±0.09 1.372±0.00
ENST00000396212 N/A N/A N/A 1.185±0.43 0.414±0.00 0.722±0.00 N/A 0.314±0.00 0.194±0.08 2.150±1.36 N/A 0.934±0.67 N/A 3.914±0.50
ENST00000561888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103550 ENST00000219837 N/A N/A N/A N/A N/A 0.984±0.00 N/A N/A 0.811±0.12 N/A N/A 1.171±0.00 N/A N/A
ENST00000564480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565844 N/A N/A N/A N/A 1.816±0.00 N/A N/A N/A N/A N/A N/A 15.568±0.00 13.291±0.00 N/A
ENST00000567367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261312 ENST00000565916 N/A N/A N/A N/A 4.987±0.00 4.066±0.00 N/A N/A N/A N/A N/A 43.205±0.00 40.738±0.00 N/A
ENSG00000276571 ENST00000621246 0.103±0.00 1.377±0.00 N/A 0.348±0.16 0.861±0.00 0.206±0.02 0.092±0.00 0.253±0.00 0.249±0.21 0.376±0.00 0.173±0.00 0.845±0.51 0.154±0.00 0.434±0.33
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030980 ENSMUST00000033277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.320±0.00 31.939±5.67 150.523±229.76
ENSMUST00000063607 9.293±0.16 N/A N/A N/A N/A N/A N/A N/A 4.147±1.37 N/A N/A 8.372±0.00 4.656±0.00 N/A
ENSMUST00000106549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.597±0.00 N/A
ENSMUST00000106550 N/A N/A N/A N/A 6.446±0.00 N/A 3.125±0.26 6.819±0.34 N/A N/A N/A 9.629±1.20 N/A N/A
ENSMUST00000116280 N/A N/A 8.800±0.74 11.047±0.81 N/A N/A N/A N/A 8.316±2.32 N/A 3.679±0.34 N/A 10.268±0.84 5.766±0.00
ENSMUST00000126792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030982 ENSMUST00000033280 N/A N/A N/A N/A N/A N/A N/A 6.446±0.35 N/A N/A N/A N/A 8.944±0.12 N/A
ENSMUST00000059390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.511±2.32 N/A
ENSMUST00000106553 17.884±1.08 N/A 12.508±0.74 21.228±0.24 12.266±1.32 8.706±1.69 6.793±0.75 12.290±2.74 7.967±2.88 17.277±1.02 4.863±0.51 16.289±4.45 19.505±1.95 8.761±0.22
ENSMUST00000129334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175952 N/A N/A N/A 95.195±0.00 N/A N/A N/A N/A N/A N/A N/A 76.883±0.00 90.298±21.91 N/A
ENSMUST00000176197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033904 ENSMUST00000038650 N/A N/A N/A 3.795±0.00 N/A N/A N/A 0.545±0.00 N/A N/A N/A N/A 0.620±0.09 17.153±0.00
ENSMUST00000106557 N/A N/A 1.461±0.00 6.500±1.62 N/A 0.164±0.00 0.123±0.03 0.589±0.20 2.748±2.12 N/A 0.303±0.15 3.008±0.00 1.072±0.39 21.905±2.40
ENSMUST00000123178 0.675±0.00 0.279±0.00 2.325±0.00 4.759±2.34 0.469±0.19 0.252±0.08 N/A 0.346±0.10 1.875±1.00 N/A 0.146±0.03 1.166±0.62 0.574±0.25 4.518±0.04
ENSMUST00000140831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149056 N/A N/A 1.258±0.00 N/A N/A N/A N/A N/A 1.747±0.88 N/A 0.178±0.00 N/A N/A N/A
ENSMUSG00000077667 ENSMUST00000104479 2171.885±222.96 N/A 48.270±0.00 10.371±0.00 N/A N/A N/A 1656.490±0.00 N/A N/A N/A N/A 29.116±0.00 3068.690±0.00

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