C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homer homolog 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103942 HOMER2 9606 - 15:82836946-82986153 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304231 HOMER2-004 82848983-82952728 protein_coding
  ENST00000450735 HOMER2-001 82848983-82952721 protein_coding
  ENST00000500334 HOMER2-009 82958130-82985868 processed_transcript
  ENST00000558090 HOMER2-005 82836946-82849727 protein_coding
  ENST00000558552 HOMER2-010 82849679-82852783 retained_intron
  ENST00000558817 HOMER2-007 82851196-82864259 protein_coding
  ENST00000560374 HOMER2-008 82864213-82986120 processed_transcript
  ENST00000561345 HOMER2-006 82854695-82898453 processed_transcript
  ENST00000619240 HOMER2-012 82985553-82986070 processed_transcript
  ENST00000619367 HOMER2-011 82892685-82986153 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304231ENST00000450735ENST00000558090ENST00000558817ENST00000561345
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.625±0.00 2.598±0.00
ENST00000450735 0.272±0.00 0.365±0.00 3.170±0.17 1.927±0.70 6.925±4.21 7.022±3.24 15.247±0.00 1.348±0.50 15.919±0.00 1.902±1.07 0.769±0.47 3.622±1.71
ENST00000558090 N/A N/A 0.909±0.00 0.476±0.16 0.383±0.00 N/A 0.691±0.40 0.451±0.17 1.561±1.05 0.275±0.00 0.019±0.00 0.578±0.18
ENST00000558817 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.203±0.00 0.760±0.00 4.814±0.00
ENST00000561345 N/A N/A N/A N/A N/A N/A 1.277±0.00 N/A N/A N/A 0.281±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026B CIL_00026B_0001 CGP 15:82809628-82986153
CIL_00026F CIL_00026F_0001 CGP 15:82836946-82991057

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007216 TAS G-protein coupled glutamate receptor signaling pathway
GO:0008277 IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0019904 IEA protein domain specific binding
GO:0030054 IDA cell junction
GO:0030160 IEA GKAP/Homer scaffold activity
GO:0030425 IEA dendrite
GO:0035254 IEA glutamate receptor binding
GO:0035256 IEA G-protein coupled glutamate receptor binding
GO:0035584 IEA calcium-mediated signaling using intracellular calcium source
GO:0042803 IEA protein homodimerization activity
GO:0043025 IEA neuronal cell body
GO:0045177 IEA apical part of cell
GO:0045211 IEA postsynaptic membrane
GO:0046982 IEA protein heterodimerization activity
GO:0048148 IEA behavioral response to cocaine
GO:0048875 IEA chemical homeostasis within a tissue

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059349 HOMER2 homer homolog 2 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000025813 Homer2 homer homolog 2 (Drosophila) protein_coding Mus_musculus

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