C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homer homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304231 HOMER2-004 ENSG00000103942 9606 - 15:82848983-82952728 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000304231
Transcript ID Placenta Testis
ENST00000304231 0.625±0.00 2.598±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026B CIL_00026B_0001 CGP 15:82809628-82986153
CIL_00026F CIL_00026F_0001 CGP 15:82836946-82991057

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007216 TAS G-protein coupled glutamate receptor signaling pathway
GO:0008277 IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0019904 IEA protein domain specific binding
GO:0030054 IDA cell junction
GO:0030160 IEA GKAP/Homer scaffold activity
GO:0030425 IEA dendrite
GO:0035254 IEA glutamate receptor binding
GO:0035256 IEA G-protein coupled glutamate receptor binding
GO:0035584 IEA calcium-mediated signaling using intracellular calcium source
GO:0042803 IEA protein homodimerization activity
GO:0043025 IEA neuronal cell body
GO:0045177 IEA apical part of cell
GO:0045211 IEA postsynaptic membrane
GO:0046982 IEA protein heterodimerization activity
GO:0048148 IEA behavioral response to cocaine
GO:0048875 IEA chemical homeostasis within a tissue

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026922 Homer2-201 protein_coding Mus_musculus 0 1718
ENSMUST00000098326 Homer2-202 protein_coding Mus_musculus 0 1495

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