C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156232-ENSG00000103942 CGP 9606 15:82809628-82986153
GeneTranscriptPositionBiotype
ENSG00000103942 (HOMER2)
homer homolog 2 (Drosophila) 		ENST00000304231 (HOMER2-004) 82848983-82952728 protein_coding
ENST00000450735 (HOMER2-001) 82848983-82952721 protein_coding
ENST00000500334 (HOMER2-009) 82958130-82985868 processed_transcript
ENST00000558090 (HOMER2-005) 82836946-82849727 protein_coding
ENST00000558552 (HOMER2-010) 82849679-82852783 retained_intron
ENST00000558817 (HOMER2-007) 82851196-82864259 protein_coding
ENST00000560374 (HOMER2-008) 82864213-82986120 processed_transcript
ENST00000561345 (HOMER2-006) 82854695-82898453 processed_transcript
ENST00000619240 (HOMER2-012) 82985553-82986070 processed_transcript
ENST00000619367 (HOMER2-011) 82892685-82986153 processed_transcript
ENSG00000156232 (WHAMM)
WAS protein homolog associated with actin, golgi membranes and microtubules 		ENST00000286760 (WHAMM-001) 82809628-82836108 protein_coding
ENST00000560964 (WHAMM-002) 82817920-82826794 retained_intron
ENSG00000259805 (RP11-382A20.5)
 ENST00000566841 (RP11-382A20.5-001) 82925884-83103443 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00026B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045795-ENSMUSG00000025813 CGP 10090 7:81571292-81706925
GeneTranscriptPositionBiotype
ENSMUSG00000025813 (Homer2)
homer homolog 2 (Drosophila) 		ENSMUST00000026922 (Homer2-201) 81600481-81706925 protein_coding
ENSMUST00000098326 (Homer2-202) 81600481-81692965 protein_coding
ENSMUSG00000045795 (Whamm)
WAS protein homolog associated with actin, golgi membranes and microtubules 		ENSMUST00000165460 (Whamm-201) 81571292-81596836 protein_coding
ENSMUSG00000088057 (Gm26149)
predicted gene, 26149 		ENSMUST00000157432 (Gm26149-201) 81669728-81669835 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026B_0001ENSG00000103942ENST00000304231ENST00000450735ENST00000500334ENST00000558090ENST00000558552ENST00000558817ENST00000560374ENST00000561345ENST00000619240ENST00000619367ENSG00000156232ENST00000286760ENST00000560964ENSG00000259805ENST00000566841CIL_00026B_0002ENSMUSG00000025813ENSMUST00000026922ENSMUST00000098326ENSMUSG00000045795ENSMUST00000165460ENSMUSG00000088057ENSMUST00000157432
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026B_0001ENSG00000103942ENST00000304231ENST00000450735ENST00000558090ENST00000558817ENST00000561345ENSG00000156232ENST00000286760ENST00000560964ENSG00000259805ENST00000566841CIL_00026B_0002ENSMUSG00000025813ENSMUST00000026922ENSMUST00000098326ENSMUSG00000045795ENSMUST00000165460ENSMUSG00000088057ENSMUST00000157432
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103942 ENST00000304231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.625±0.00 2.598±0.00
ENST00000450735 0.272±0.00 0.365±0.00 N/A 3.170±0.17 1.927±0.70 N/A 6.925±4.21 7.022±3.24 15.247±0.00 1.348±0.50 15.919±0.00 1.902±1.07 0.769±0.47 3.622±1.71
ENST00000500334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558090 N/A N/A N/A 0.909±0.00 0.476±0.16 N/A 0.383±0.00 N/A 0.691±0.40 0.451±0.17 1.561±1.05 0.275±0.00 0.019±0.00 0.578±0.18
ENST00000558552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.203±0.00 0.760±0.00 4.814±0.00
ENST00000560374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561345 N/A N/A N/A N/A N/A N/A N/A N/A 1.277±0.00 N/A N/A N/A 0.281±0.00 N/A
ENST00000619240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156232 ENST00000286760 3.526±0.00 3.890±0.00 0.887±0.00 2.152±1.05 2.293±0.94 2.389±0.00 1.209±0.51 1.649±1.04 1.976±0.60 2.703±1.03 4.969±3.68 1.781±0.60 1.914±1.32 2.056±0.50
ENST00000560964 N/A N/A N/A N/A 1.509±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259805 ENST00000566841 0.037±0.00 0.166±0.00 N/A 0.040±0.00 0.283±0.23 0.051±0.00 0.118±0.00 0.091±0.00 0.061±0.00 0.086±0.02 0.125±0.00 0.137±0.09 0.074±0.00 0.211±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025813 ENSMUST00000026922 0.577±0.35 0.283±0.07 0.826±0.18 1.942±0.41 0.897±0.34 4.986±2.47 4.137±0.35 0.175±0.04 2.343±1.88 0.638±0.10 1.787±1.05 1.283±0.70 1.876±0.54 0.071±0.00
ENSMUST00000098326 N/A N/A N/A N/A N/A 1.679±0.00 N/A N/A N/A N/A N/A 0.477±0.09 N/A N/A
ENSMUSG00000045795 ENSMUST00000165460 7.449±1.13 15.988±6.72 7.223±0.50 5.348±2.43 7.582±4.10 12.102±4.18 2.659±0.83 3.009±1.69 10.257±5.02 7.556±2.91 2.571±0.35 9.998±3.11 8.950±3.87 11.062±2.90
ENSMUSG00000088057 ENSMUST00000157432 N/A N/A N/A 195.814±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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