C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homer homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558090 HOMER2-005 ENSG00000103942 9606 - 15:82836946-82849727 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000558090
Transcript ID Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000558090 0.909±0.00 0.476±0.16 0.383±0.00 0.691±0.40 0.451±0.17 1.561±1.05 0.275±0.00 0.019±0.00 0.578±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026B CIL_00026B_0001 CGP 15:82809628-82986153
CIL_00026F CIL_00026F_0001 CGP 15:82836946-82991057

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140795 Abat-002 retained_intron Mus_musculus 0.0000003 64
ENSMUST00000029674 Efna4-001 protein_coding Mus_musculus 0.000004 60
ENSMUST00000030474 Nsun4-002 nonsense_mediated_decay Mus_musculus 0.0007 53

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