C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104529 EEF1D 9606 - 8:143579697-143599541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317198 EEF1D-201 143579697-143597388 protein_coding
  ENST00000395119 EEF1D-002 143579728-143597679 protein_coding
  ENST00000419152 EEF1D-202 143579697-143597675 protein_coding
  ENST00000423316 EEF1D-203 143579697-143597675 protein_coding
  ENST00000442189 EEF1D-001 143579728-143597415 protein_coding
  ENST00000524397 EEF1D-012 143580010-143597404 nonsense_mediated_decay
  ENST00000524624 EEF1D-053 143579736-143597415 protein_coding
  ENST00000524883 EEF1D-037 143589540-143590893 protein_coding
  ENST00000524900 EEF1D-044 143589894-143597411 protein_coding
  ENST00000525223 EEF1D-050 143586729-143589316 protein_coding
  ENST00000525261 EEF1D-031 143589838-143597415 protein_coding
  ENST00000525695 EEF1D-023 143586032-143597381 retained_intron
  ENST00000526133 EEF1D-022 143589972-143597111 protein_coding
  ENST00000526135 EEF1D-038 143589922-143592893 protein_coding
  ENST00000526340 EEF1D-039 143586219-143597393 protein_coding
  ENST00000526710 EEF1D-040 143589181-143597442 protein_coding
  ENST00000526786 EEF1D-025 143580389-143597388 retained_intron
  ENST00000526838 EEF1D-005 143579728-143597413 protein_coding
  ENST00000527741 EEF1D-008 143579728-143584251 retained_intron
  ENST00000528303 EEF1D-026 143590018-143597415 protein_coding
  ENST00000528382 EEF1D-013 143580079-143586817 protein_coding
  ENST00000528519 EEF1D-036 143589610-143592169 protein_coding
  ENST00000528610 EEF1D-004 143579728-143597425 protein_coding
  ENST00000529007 EEF1D-009 143579729-143597387 nonsense_mediated_decay
  ENST00000529272 EEF1D-006 143579728-143597744 protein_coding
  ENST00000529516 EEF1D-019 143580642-143597397 protein_coding
  ENST00000529576 EEF1D-015 143579728-143580637 protein_coding
  ENST00000529832 EEF1D-043 143589644-143597415 protein_coding
  ENST00000530109 EEF1D-014 143579728-143580740 protein_coding
  ENST00000530191 EEF1D-032 143580506-143597402 protein_coding
  ENST00000530306 EEF1D-041 143589695-143597415 protein_coding
  ENST00000530445 EEF1D-017 143580620-143587564 protein_coding
  ENST00000530545 EEF1D-027 143589830-143597415 protein_coding
  ENST00000530616 EEF1D-011 143580513-143589222 protein_coding
  ENST00000530848 EEF1D-018 143580564-143597400 retained_intron
  ENST00000531218 EEF1D-046 143580522-143597380 protein_coding
  ENST00000531281 EEF1D-035 143589311-143596129 protein_coding
  ENST00000531621 EEF1D-020 143579729-143597400 protein_coding
  ENST00000531670 EEF1D-034 143589545-143596345 protein_coding
  ENST00000531770 EEF1D-028 143592654-143597414 processed_transcript
  ENST00000531931 EEF1D-024 143586740-143597413 protein_coding
  ENST00000531953 EEF1D-021 143589934-143597105 protein_coding
  ENST00000532400 EEF1D-016 143579722-143597396 protein_coding
  ENST00000532543 EEF1D-033 143586729-143596754 protein_coding
  ENST00000532596 EEF1D-042 143589511-143597415 protein_coding
  ENST00000532741 EEF1D-007 143579728-143590460 protein_coding
  ENST00000533204 EEF1D-047 143580506-143597394 protein_coding
  ENST00000533494 EEF1D-045 143580613-143597365 protein_coding
  ENST00000533749 EEF1D-052 143581079-143599541 protein_coding
  ENST00000533833 EEF1D-010 143579728-143597428 nonsense_mediated_decay
  ENST00000534232 EEF1D-051 143580663-143597384 retained_intron
  ENST00000534377 EEF1D-049 143580186-143597399 protein_coding
  ENST00000534380 EEF1D-048 143580034-143597362 protein_coding
  ENST00000534475 EEF1D-030 143589988-143597413 protein_coding
  ENST00000534804 EEF1D-029 143589877-143597415 protein_coding
  ENST00000618139 EEF1D-204 143580019-143597675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395119ENST00000526838ENST00000528382ENST00000528610ENST00000529007ENST00000530109ENST00000530848ENST00000531218ENST00000532400ENST00000534377
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.310±0.00 N/A N/A N/A
ENST00000526838 N/A N/A N/A N/A N/A N/A 30.199±18.30 N/A 82.982±0.00 190.182±0.00 138.898±0.00 157.299±96.28 134.269±38.25 N/A
ENST00000528382 N/A N/A N/A N/A N/A 430.664±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528610 N/A 134.276±0.00 N/A N/A 55.689±20.54 N/A 24.786±12.30 43.331±0.00 38.658±0.00 N/A N/A 240.539±82.18 82.726±0.00 88.499±0.00
ENST00000529007 199.256±0.00 237.771±0.00 N/A 29.569±0.00 140.469±0.00 216.848±0.00 61.486±0.00 94.552±0.00 83.087±0.00 169.873±0.00 113.768±0.00 211.539±19.48 122.179±43.80 165.556±0.00
ENST00000530109 N/A N/A 68.201±0.00 49.213±4.22 118.403±0.00 128.926±0.00 57.346±0.00 165.778±0.00 163.204±0.00 103.810±0.00 245.035±0.00 262.576±92.39 179.013±53.59 146.414±0.00
ENST00000530848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 98.901±0.00 N/A
ENST00000531218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 246.214±0.00 N/A N/A
ENST00000532400 N/A N/A 82.778±0.00 60.599±0.00 N/A 97.436±0.00 34.743±0.00 N/A 135.010±0.00 78.267±0.00 N/A N/A N/A N/A
ENST00000534377 254.166±0.00 214.864±0.00 N/A 55.263±0.00 143.341±0.00 281.456±0.00 N/A 142.635±0.00 N/A 167.229±0.00 N/A 241.547±0.00 143.287±40.27 216.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0003C6 CIL_0003C6_0001 CGP 8:143574785-143599541

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003746 IEA translation elongation factor activity
GO:0004871 IMP signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005853 IEA eukaryotic translation elongation factor 1 complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006412 TAS translation
GO:0006414 IEA:TAS translational elongation
GO:0007165 IMP signal transduction
GO:0008135 TAS translation factor activity, nucleic acid binding
GO:0010467 TAS gene expression
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030053 eef1db elongation factor-1, delta, b protein_coding Danio_rerio
ENSMUSG00000055762 Eef1d eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) protein_coding Mus_musculus

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