C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534377 EEF1D-049 ENSG00000104529 9606 - 8:143580186-143597399 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000534377
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000534377 254.166±0.00 214.864±0.00 55.263±0.00 143.341±0.00 281.456±0.00 142.635±0.00 167.229±0.00 241.547±0.00 143.287±40.27 216.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0003C6 CIL_0003C6_0001 CGP 8:143574785-143599541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0005853 IEA eukaryotic translation elongation factor 1 complex
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116440 Eef1d-013 protein_coding Mus_musculus 0 616
ENSMUST00000119777 Gm12848-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000023235 Eef1d-015 protein_coding Mus_musculus 0 189
ENSMUST00000089680 Eef1d-005 protein_coding Mus_musculus 0 189
ENSMUST00000151066 Eef1d-016 protein_coding Mus_musculus 0 189
ENSMUST00000121873 Gm11675-001 processed_pseudogene Mus_musculus 3e-36 156

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