C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lymphoblastic leukemia associated hematopoiesis regulator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104903 LYL1 9606 - 19:13099033-13103161 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264824 LYL1-001 13099033-13102867 protein_coding
  ENST00000590120 LYL1-002 13101178-13102724 retained_intron
  ENST00000590974 LYL1-003 13100690-13103161 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264824ENST00000590120ENST00000590974
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264824 2.662±0.00 18.155±0.00 N/A 0.746±0.67 4.774±0.00 1.594±1.48 1.320±1.06 2.312±0.00 0.403±0.27 5.897±5.06 1.217±0.00 3.126±2.23 21.916±7.47 14.835±5.40
ENST00000590120 N/A 2.670±0.00 N/A 0.043±0.00 N/A N/A 0.123±0.01 N/A 0.074±0.00 N/A N/A 0.199±0.00 N/A N/A
ENST00000590974 1.002±0.00 N/A 0.916±0.00 0.443±0.00 N/A 0.585±0.00 0.534±0.00 0.203±0.00 1.356±0.00 N/A N/A 0.177±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012
CIL_0004F9 CIL_0004F9_0001 CGP 19:12995608-13103161

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001955 IMP blood vessel maturation
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0030183 ISS B cell differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity
GO:0060216 ISS definitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019930 tal1 T-cell acute lymphocytic leukemia 1 protein_coding Danio_rerio
ENSMUSG00000034041 Lyl1 lymphoblastomic leukemia 1 protein_coding Mus_musculus

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