C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004F9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000008441-ENSG00000104903 CGP 9606 19:12995608-13103161
GeneTranscriptPositionBiotype
ENSG00000008441 (NFIX)
nuclear factor I/X (CCAAT-binding transcription factor) 		ENST00000358552 (NFIX-201) 13024580-13098766 protein_coding
ENST00000360105 (NFIX-003) 13024580-13098796 protein_coding
ENST00000397661 (NFIX-001) 12995608-13096201 protein_coding
ENST00000585382 (NFIX-009) 13012207-13081835 nonsense_mediated_decay
ENST00000585575 (NFIX-006) 13024032-13094649 protein_coding
ENST00000586797 (NFIX-005) 13024585-13094684 nonsense_mediated_decay
ENST00000586873 (NFIX-011) 13024627-13025510 protein_coding
ENST00000587260 (NFIX-007) 13024939-13094770 protein_coding
ENST00000587760 (NFIX-002) 13023991-13094758 protein_coding
ENST00000588228 (NFIX-004) 13024581-13094755 protein_coding
ENST00000588680 (NFIX-012) 13070003-13074019 processed_transcript
ENST00000590027 (NFIX-008) 13012188-13025520 protein_coding
ENST00000591028 (NFIX-010) 13024613-13025495 protein_coding
ENST00000592199 (NFIX-013) 12995838-13094649 protein_coding
ENSG00000104903 (LYL1)
lymphoblastic leukemia associated hematopoiesis regulator 1 		ENST00000264824 (LYL1-001) 13099033-13102867 protein_coding
ENST00000590120 (LYL1-002) 13101178-13102724 retained_intron
ENST00000590974 (LYL1-003) 13100690-13103161 protein_coding
ENSG00000267417 (CTC-239J10.1)
 ENST00000586630 (CTC-239J10.1-001) 13013662-13014511 antisense
ENSG00000279044 (AC007787.3)
 ENST00000625100 (AC007787.3-001) 13081966-13082564 TEC
CIL_0004F9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001911-ENSMUSG00000001911 CGP 10090 8:84699876-84800344
GeneTranscriptPositionBiotype
ENSMUSG00000001911 (Nfix)
nuclear factor I/X 		ENSMUST00000076715 (Nfix-003) 84708614-84800140 protein_coding
ENSMUST00000099070 (Nfix-002) 84708616-84800344 protein_coding
ENSMUST00000109762 (Nfix-004) 84708626-84774369 protein_coding
ENSMUST00000109764 (Nfix-001) 84704712-84773396 protein_coding
ENSMUST00000126806 (Nfix-005) 84713795-84800024 protein_coding
ENSMUST00000132236 (Nfix-006) 84708634-84714068 retained_intron
ENSMUST00000148644 (Nfix-008) 84699876-84708218 processed_transcript
ENSMUST00000148746 (Nfix-007) 84704712-84707716 processed_transcript
ENSMUSG00000034041 (Lyl1)
lymphoblastomic leukemia 1 		ENSMUST00000037165 (Lyl1-201) 84701457-84704715 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004F9_0001ENSG00000008441ENST00000358552ENST00000360105ENST00000397661ENST00000585382ENST00000585575ENST00000586797ENST00000586873ENST00000587260ENST00000587760ENST00000588228ENST00000588680ENST00000590027ENST00000591028ENST00000592199ENSG00000104903ENST00000264824ENST00000590120ENST00000590974ENSG00000267417ENST00000586630ENSG00000279044ENST00000625100CIL_0004F9_0002ENSMUSG00000001911ENSMUST00000076715ENSMUST00000099070ENSMUST00000109762ENSMUST00000109764ENSMUST00000126806ENSMUST00000132236ENSMUST00000148644ENSMUST00000148746ENSMUSG00000034041ENSMUST00000037165
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004F9_0001ENSG00000008441ENST00000358552ENST00000360105ENST00000397661ENST00000586797ENST00000587260ENST00000587760ENSG00000104903ENST00000264824ENST00000590120ENST00000590974ENSG00000267417ENST00000586630ENSG00000279044ENST00000625100CIL_0004F9_0002ENSMUSG00000001911ENSMUST00000076715ENSMUST00000099070ENSMUST00000109764ENSMUST00000126806ENSMUSG00000034041ENSMUST00000037165
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008441 ENST00000358552 N/A N/A N/A 1.560±0.00 N/A N/A 0.776±0.00 N/A N/A N/A N/A 1.983±0.94 N/A N/A
ENST00000360105 10.016±0.00 10.640±0.00 N/A 13.926±0.00 10.790±9.30 6.667±6.24 0.362±0.00 N/A 4.028±0.00 N/A 58.161±0.00 18.496±6.47 4.945±3.73 9.827±3.98
ENST00000397661 N/A N/A N/A 0.852±0.00 N/A N/A N/A N/A N/A N/A N/A 16.123±12.97 2.153±0.34 3.847±0.00
ENST00000585382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.869±0.00 N/A N/A
ENST00000586873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587260 N/A N/A N/A 2.959±0.00 N/A N/A N/A N/A N/A N/A 9.655±0.00 N/A N/A N/A
ENST00000587760 N/A N/A N/A 3.267±0.00 3.090±0.00 2.737±0.00 1.813±0.00 N/A N/A 2.347±0.00 N/A N/A N/A N/A
ENST00000588228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000104903 ENST00000264824 2.662±0.00 18.155±0.00 N/A 0.746±0.67 4.774±0.00 1.594±1.48 1.320±1.06 2.312±0.00 0.403±0.27 5.897±5.06 1.217±0.00 3.126±2.23 21.916±7.47 14.835±5.40
ENST00000590120 N/A 2.670±0.00 N/A 0.043±0.00 N/A N/A 0.123±0.01 N/A 0.074±0.00 N/A N/A 0.199±0.00 N/A N/A
ENST00000590974 1.002±0.00 N/A 0.916±0.00 0.443±0.00 N/A 0.585±0.00 0.534±0.00 0.203±0.00 1.356±0.00 N/A N/A 0.177±0.00 N/A N/A
ENSG00000267417 ENST00000586630 N/A 0.124±0.00 N/A 0.199±0.00 0.342±0.00 N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A 0.364±0.00
ENSG00000279044 ENST00000625100 0.126±0.00 0.163±0.00 N/A 0.153±0.00 0.675±0.64 0.062±0.00 N/A N/A 0.187±0.13 0.331±0.00 0.589±0.00 0.182±0.06 N/A 0.182±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001911 ENSMUST00000076715 18.773±0.00 N/A N/A N/A 5.255±0.00 5.932±1.12 N/A N/A 5.672±0.88 N/A 34.936±7.87 12.524±2.01 N/A 0.513±0.00
ENSMUST00000099070 N/A N/A N/A N/A N/A N/A 8.089±0.00 N/A N/A N/A N/A N/A N/A 1.021±0.00
ENSMUST00000109762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109764 9.835±3.24 7.359±3.25 10.368±2.51 11.328±3.68 10.025±6.08 7.323±0.93 3.633±0.00 1.679±0.71 3.013±2.31 12.140±4.93 11.087±5.17 8.092±2.50 0.321±0.13 0.446±0.08
ENSMUST00000126806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.680±0.00
ENSMUST00000132236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034041 ENSMUST00000037165 11.724±0.99 5.362±1.22 5.793±0.00 N/A 18.896±5.08 4.151±0.55 N/A 1.812±0.00 41.521±15.54 10.918±1.15 N/A N/A 2.187±0.97 0.742±0.16

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