C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 27 (VPS9 domain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306065 ANKRD27-001 ENSG00000105186 9606 - 19:32597007-32675199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306065
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306065 0.886±0.00 3.207±0.00 1.143±0.00 2.280±0.36 2.207±0.33 5.102±1.93 2.466±1.22 7.060±0.00 3.443±2.11 4.089±0.00 11.015±0.00 6.040±1.87 4.925±2.06 5.875±0.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IDA guanyl-nucleotide exchange factor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005764 IDA lysosome
GO:0005769 IDA early endosome
GO:0016020 IDA membrane
GO:0043547 IEA positive regulation of GTPase activity
GO:0045022 IDA early endosome to late endosome transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040844 Ankrd27-001 protein_coding Mus_musculus 0 2551
ENSMUST00000190503 Ankrd27-003 protein_coding Mus_musculus 0 1884
ENSMUST00000186245 Ankrd27-002 protein_coding Mus_musculus 0 1179
ENSMUST00000187807 Ankrd27-006 protein_coding Mus_musculus 0 370

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