C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105321 CCDC9 9606 + 19:47255980-47271953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221922 CCDC9-001 47256459-47271953 protein_coding
  ENST00000595659 CCDC9-004 47257540-47260382 protein_coding
  ENST00000596938 CCDC9-005 47258089-47260357 protein_coding
  ENST00000599398 CCDC9-003 47257532-47260762 protein_coding
  ENST00000600117 CCDC9-006 47266295-47270587 retained_intron
  ENST00000601154 CCDC9-007 47255980-47256597 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221922ENST00000595659ENST00000599398ENST00000600117
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221922 12.237±0.00 23.377±0.00 0.560±0.00 1.934±0.94 5.952±5.14 3.463±2.86 5.683±0.00 3.403±3.05 2.556±0.00 24.974±0.00 13.367±0.00 10.662±13.89 3.625±1.50 16.084±9.09
ENST00000595659 N/A N/A 2.847±0.00 N/A 9.468±0.00 6.689±0.00 N/A 7.468±0.00 3.674±0.00 N/A N/A 9.591±2.16 17.689±0.00 17.116±0.00
ENST00000599398 N/A N/A 0.367±0.00 N/A N/A 0.422±0.00 0.314±0.00 N/A 1.169±0.00 N/A 2.971±0.00 1.226±0.00 N/A N/A
ENST00000600117 N/A N/A N/A N/A 1.085±0.00 N/A N/A N/A N/A 1.433±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636

Gene Ontology
GO IDEvidence TypeGO Description
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004636 ccdc9 coiled-coil domain containing 9 protein_coding Danio_rerio
ENSMUSG00000041375 Ccdc9 coiled-coil domain containing 9 protein_coding Mus_musculus

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