C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rab acceptor 1 (prenylated)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105404 RABAC1 9606 - 19:41956681-41959390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222008 RABAC1-001 41956681-41959390 protein_coding
  ENST00000595226 RABAC1-009 41956692-41957499 retained_intron
  ENST00000596171 RABAC1-002 41957034-41959310 retained_intron
  ENST00000598057 RABAC1-010 41956681-41957342 retained_intron
  ENST00000599219 RABAC1-003 41958152-41959302 retained_intron
  ENST00000600292 RABAC1-007 41956681-41959266 protein_coding
  ENST00000601028 RABAC1-008 41956686-41958914 protein_coding
  ENST00000601078 RABAC1-005 41956781-41959275 protein_coding
  ENST00000601476 RABAC1-006 41957859-41959269 retained_intron
  ENST00000601891 RABAC1-004 41956681-41959299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222008ENST00000598057ENST00000600292ENST00000601078ENST00000601476
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222008 121.445±0.00 154.415±0.00 3.304±0.00 54.019±38.69 55.591±47.68 75.566±70.56 11.271±10.33 67.893±60.13 48.332±42.54 63.181±57.56 25.312±19.73 97.851±45.69 113.613±7.13 120.294±40.30
ENST00000598057 N/A N/A N/A N/A N/A 3.153±0.00 N/A N/A N/A N/A N/A 0.639±0.00 N/A N/A
ENST00000600292 47.530±0.00 N/A N/A N/A 22.588±0.00 N/A 7.488±0.00 N/A 45.130±0.00 24.363±0.00 7.623±0.00 23.076±0.00 58.081±2.58 N/A
ENST00000601078 N/A N/A N/A N/A N/A N/A 4.289±0.00 N/A N/A N/A 1.319±0.00 N/A N/A N/A
ENST00000601476 N/A N/A 0.757±0.00 N/A N/A N/A 0.694±0.00 N/A 2.554±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VE CIL_0003VE_0001 CGP 19:41883161-41959390
CIL_00030U CIL_00030U_0001 CGP 19:41956681-41997497

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008022 IEA protein C-terminus binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0042802 IPI identical protein binding
GO:0045202 IEA synapse
GO:0070064 IEA proline-rich region binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004171 rabac1 Rab acceptor 1 (prenylated) protein_coding Danio_rerio
ENSMUSG00000003380 Rabac1 Rab acceptor 1 (prenylated) protein_coding Mus_musculus

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