C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rab acceptor 1 (prenylated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222008 RABAC1-001 ENSG00000105404 9606 - 19:41956681-41959390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222008
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222008 121.445±0.00 154.415±0.00 3.304±0.00 54.019±38.69 55.591±47.68 75.566±70.56 11.271±10.33 67.893±60.13 48.332±42.54 63.181±57.56 25.312±19.73 97.851±45.69 113.613±7.13 120.294±40.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VE CIL_0003VE_0001 CGP 19:41883161-41959390
CIL_00030U CIL_00030U_0001 CGP 19:41956681-41997497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008022 IEA protein C-terminus binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0042802 IPI identical protein binding
GO:0045202 IEA synapse
GO:0070064 IEA proline-rich region binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076961 Rabac1-201 protein_coding Mus_musculus 0 750

Loading