C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB3D, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105514 RAB3D 9606 - 19:11322046-11346270 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222120 RAB3D-001 11322046-11339668 protein_coding
  ENST00000589655 RAB3D-002 11325339-11346270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000222120
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000222120 5.279±0.00 4.846±0.00 0.923±0.00 2.881±1.52 5.010±2.45 5.126±4.50 1.962±0.00 6.057±0.00 1.419±0.00 2.556±0.76 6.447±2.79 5.665±1.64 8.422±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016R CIL_00016R_0002 CGP 19:11322046-11346518

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 TAS:IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006184 TAS:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006887 IEA exocytosis
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017157 IEA regulation of exocytosis
GO:0018125 IEA peptidyl-cysteine methylation
GO:0030133 IEA transport vesicle
GO:0031489 IPI myosin V binding
GO:0042588 IEA zymogen granule
GO:0051020 IEA GTPase binding
GO:0070062 IDA extracellular vesicular exosome
GO:1903307 IMP positive regulation of regulated secretory pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018107 rab3da RAB3D, member RAS oncogene family, a protein_coding Danio_rerio
ENSDARG00000043607 rab3db RAB3D, member RAS oncogene family, b protein_coding Danio_rerio
ENSMUSG00000019066 Rab3d RAB3D, member RAS oncogene family protein_coding Mus_musculus

Loading