C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00016R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043607-ENSDARG00000043604 CGP 7955 3:13566848-13605349
GeneTranscriptPositionBiotype
ENSDARG00000043604 (tmem205)
transmembrane protein 205 		ENSDART00000064028 (tmem205-001) 13595663-13605349 protein_coding
ENSDART00000137099 (tmem205-002) 13596168-13605309 protein_coding
ENSDART00000139990 (tmem205-003) 13597051-13605306 protein_coding
ENSDART00000144081 (tmem205-004) 13601403-13605331 protein_coding
ENSDARG00000043607 (rab3db)
RAB3D, member RAS oncogene family, b 		ENSDART00000064031 (rab3db-001) 13566848-13591754 protein_coding
CIL_00016R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105514-ENSG00000105518 CGP 9606 19:11322046-11346518
GeneTranscriptPositionBiotype
ENSG00000105514 (RAB3D)
RAB3D, member RAS oncogene family 		ENST00000222120 (RAB3D-001) 11322046-11339668 protein_coding
ENST00000589655 (RAB3D-002) 11325339-11346270 protein_coding
ENSG00000105518 (TMEM205)
transmembrane protein 205 		ENST00000354882 (TMEM205-004) 11342778-11346046 protein_coding
ENST00000447337 (TMEM205-201) 11342776-11346305 protein_coding
ENST00000585722 (TMEM205-005) 11342778-11346055 retained_intron
ENST00000586218 (TMEM205-011) 11342776-11346210 protein_coding
ENST00000586590 (TMEM205-002) 11342778-11346268 protein_coding
ENST00000586701 (TMEM205-014) 11342842-11346327 protein_coding
ENST00000586956 (TMEM205-009) 11342778-11346285 protein_coding
ENST00000587948 (TMEM205-013) 11342779-11346406 protein_coding
ENST00000588321 (TMEM205-006) 11342810-11346256 retained_intron
ENST00000588560 (TMEM205-003) 11342785-11346248 protein_coding
ENST00000589555 (TMEM205-010) 11342779-11346271 protein_coding
ENST00000590482 (TMEM205-012) 11342873-11346518 protein_coding
ENST00000590788 (TMEM205-016) 11345252-11346262 protein_coding
ENST00000591677 (TMEM205-008) 11343064-11346305 protein_coding
ENST00000592952 (TMEM205-015) 11342850-11346255 protein_coding
ENST00000593256 (TMEM205-001) 11342776-11346300 protein_coding
ENSG00000183401 (CCDC159)
coiled-coil domain containing 159 		ENST00000458408 (CCDC159-201) 11346505-11354943 protein_coding
ENST00000586451 (CCDC159-006) 11346533-11351973 protein_coding
ENST00000586479 (CCDC159-017) 11351748-11353749 processed_transcript
ENST00000587100 (CCDC159-008) 11344695-11346466 processed_transcript
ENST00000587531 (CCDC159-012) 11346556-11350979 protein_coding
ENST00000587868 (CCDC159-021) 11350885-11354699 retained_intron
ENST00000588464 (CCDC159-016) 11351793-11353737 retained_intron
ENST00000588592 (CCDC159-011) 11346540-11351940 protein_coding
ENST00000588790 (CCDC159-001) 11345301-11354944 protein_coding
ENST00000588821 (CCDC159-004) 11346531-11351486 retained_intron
ENST00000589016 (CCDC159-005) 11346565-11351486 retained_intron
ENST00000589022 (CCDC159-018) 11351932-11354944 retained_intron
ENST00000589186 (CCDC159-009) 11344684-11346298 processed_transcript
ENST00000589477 (CCDC159-015) 11346581-11349693 retained_intron
ENST00000590054 (CCDC159-003) 11346531-11352499 retained_intron
ENST00000590636 (CCDC159-013) 11346572-11350989 nonsense_mediated_decay
ENST00000590919 (CCDC159-010) 11346505-11350868 nonsense_mediated_decay
ENST00000591260 (CCDC159-020) 11349663-11354681 protein_coding
ENST00000591691 (CCDC159-019) 11351962-11354943 protein_coding
ENST00000592723 (CCDC159-014) 11346540-11353827 nonsense_mediated_decay
ENSG00000267576 (CTC-510F12.6)
 ENST00000586051 (CTC-510F12.6-001) 11322156-11324195 sense_intronic
CIL_00016R_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019066-ENSMUSG00000040883 CGP 10090 9:21907491-21927535
GeneTranscriptPositionBiotype
ENSMUSG00000006241 (Ccdc159)
coiled-coil domain containing 159 		ENSMUST00000006403 (Ccdc159-201) 21927471-21935872 protein_coding
ENSMUST00000170304 (Ccdc159-202) 21927471-21935872 protein_coding
ENSMUSG00000019066 (Rab3d)
RAB3D, member RAS oncogene family 		ENSMUST00000115351 (Rab3d-001) 21907491-21918192 protein_coding
ENSMUST00000119055 (Rab3d-005) 21908642-21918117 protein_coding
ENSMUST00000122211 (Rab3d-002) 21907510-21918139 protein_coding
ENSMUST00000128442 (Rab3d-004) 21914892-21918089 protein_coding
ENSMUST00000154019 (Rab3d-003) 21915615-21918121 retained_intron
ENSMUSG00000040883 (Tmem205)
transmembrane protein 205 		ENSMUST00000046831 (Tmem205-201) 21921010-21927535 protein_coding
ENSMUST00000178988 (Tmem205-202) 21921010-21927535 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016R_0001ENSDARG00000043604ENSDART00000064028ENSDART00000137099ENSDART00000139990ENSDART00000144081ENSDARG00000043607ENSDART00000064031CIL_00016R_0002ENSG00000105514ENST00000222120ENST00000589655ENSG00000105518ENST00000354882ENST00000447337ENST00000585722ENST00000586218ENST00000586590ENST00000586701ENST00000586956ENST00000587948ENST00000588321ENST00000588560ENST00000589555ENST00000590482ENST00000590788ENST00000591677ENST00000592952ENST00000593256ENSG00000183401ENST00000458408ENST00000586451ENST00000586479ENST00000587100ENST00000587531ENST00000587868ENST00000588464ENST00000588592ENST00000588790ENST00000588821ENST00000589016ENST00000589022ENST00000589186ENST00000589477ENST00000590054ENST00000590636ENST00000590919ENST00000591260ENST00000591691ENST00000592723ENSG00000267576ENST00000586051CIL_00016R_0003ENSMUSG00000006241ENSMUST00000006403ENSMUST00000170304ENSMUSG00000019066ENSMUST00000115351ENSMUST00000119055ENSMUST00000122211ENSMUST00000128442ENSMUST00000154019ENSMUSG00000040883ENSMUST00000046831ENSMUST00000178988
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016R_0001ENSDARG00000043604ENSDART00000064028ENSDART00000137099ENSDART00000139990ENSDARG00000043607ENSDART00000064031CIL_00016R_0002ENSG00000105514ENST00000222120ENSG00000105518ENST00000354882ENST00000588560ENST00000589555ENST00000590482ENST00000593256ENSG00000183401ENST00000458408ENST00000589186ENSG00000267576ENST00000586051CIL_00016R_0003ENSMUSG00000006241ENSMUST00000006403ENSMUST00000170304ENSMUSG00000019066ENSMUST00000115351ENSMUST00000119055ENSMUST00000122211ENSMUSG00000040883ENSMUST00000046831ENSMUST00000178988
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043604 ENSDART00000064028 N/A N/A N/A 5.290±1.17 N/A N/A 4.330±1.86 5.673±0.86 0.380±0.00 N/A 0.990±0.00 N/A N/A N/A
ENSDART00000137099 N/A N/A N/A N/A N/A N/A 2.360±1.48 2.997±0.95 N/A N/A N/A N/A N/A N/A
ENSDART00000139990 N/A N/A N/A 4.394±2.05 N/A N/A 5.120±2.43 6.198±0.00 0.233±0.00 N/A N/A N/A N/A N/A
ENSDART00000144081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000043607 ENSDART00000064031 N/A N/A N/A 1.432±0.35 N/A N/A 2.278±0.56 10.246±4.40 0.151±0.00 N/A 0.710±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105514 ENST00000222120 5.279±0.00 4.846±0.00 0.923±0.00 2.881±1.52 5.010±2.45 5.126±4.50 1.962±0.00 6.057±0.00 1.419±0.00 2.556±0.76 N/A 6.447±2.79 5.665±1.64 8.422±0.00
ENST00000589655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000105518 ENST00000354882 N/A N/A N/A 13.876±5.40 N/A 2.690±0.00 1.469±0.00 N/A 5.362±0.00 N/A N/A 19.819±0.00 N/A N/A
ENST00000447337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588560 N/A N/A N/A N/A N/A N/A N/A 13.437±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589555 N/A 26.608±0.00 5.550±0.00 28.295±0.00 N/A N/A 15.073±0.00 N/A N/A 34.012±0.00 15.903±0.00 N/A N/A N/A
ENST00000590482 N/A 45.228±0.00 N/A 10.651±0.00 57.335±0.00 N/A 21.914±0.00 49.830±0.00 74.645±0.00 N/A 25.284±0.00 N/A N/A N/A
ENST00000590788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593256 N/A N/A 7.048±0.00 N/A N/A N/A 10.670±8.79 33.789±11.19 55.020±0.00 5.475±0.00 18.696±2.30 36.374±21.23 59.674±20.71 N/A
ENSG00000183401 ENST00000458408 N/A N/A N/A N/A N/A N/A 1.329±0.00 N/A N/A N/A N/A N/A 6.152±0.00 25.092±0.00
ENST00000586451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589186 36.913±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.152±0.00 N/A N/A N/A
ENST00000589477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267576 ENST00000586051 17.909±0.00 14.777±0.00 3.619±0.00 6.828±3.56 13.890±8.01 18.140±15.80 0.817±0.00 15.710±0.00 3.820±0.00 10.530±6.41 N/A 15.817±8.05 9.440±3.56 25.880±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006241 ENSMUST00000006403 N/A N/A 2.487±0.26 3.183±0.61 N/A N/A N/A N/A N/A N/A 0.500±0.00 4.713±0.00 0.453±0.00 20.972±2.59
ENSMUST00000170304 N/A N/A N/A 2.286±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.391±0.60
ENSMUSG00000019066 ENSMUST00000115351 30.455±11.89 31.676±2.43 19.027±0.51 3.532±2.33 24.049±1.20 58.170±2.28 4.067±0.49 5.335±0.39 4.626±2.46 21.905±0.44 0.954±0.11 12.556±3.54 2.795±2.32 3.785±1.87
ENSMUST00000119055 49.832±24.05 33.624±6.85 N/A 5.332±1.53 39.454±4.50 78.934±11.09 6.158±1.41 8.042±2.25 4.924±2.70 31.421±2.08 N/A 16.836±2.28 5.440±0.79 5.287±1.72
ENSMUST00000122211 N/A N/A N/A 0.212±0.00 N/A N/A N/A N/A N/A N/A 0.151±0.00 2.215±1.01 0.197±0.00 N/A
ENSMUST00000128442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040883 ENSMUST00000046831 85.639±35.48 540.064±32.82 32.166±3.13 8.429±3.99 68.369±21.75 52.009±2.40 37.788±9.71 100.150±8.02 318.808±270.11 67.876±7.66 5.859±1.74 50.289±20.36 10.399±10.24 91.443±42.17
ENSMUST00000178988 18.902±7.73 127.449±10.03 11.919±1.59 N/A 19.321±5.52 12.459±2.03 8.488±2.68 26.659±1.85 99.352±87.04 17.102±2.98 2.245±0.76 14.627±4.65 5.734±4.98 23.640±10.09

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