C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HMG-box transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105856 HBP1 9606 + 7:107168961-107202529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222574 HBP1-001 107169015-107202529 protein_coding
  ENST00000461963 HBP1-010 107186464-107200300 processed_transcript
  ENST00000463202 HBP1-012 107179878-107201404 retained_intron
  ENST00000463790 HBP1-014 107195982-107201454 nonsense_mediated_decay
  ENST00000464009 HBP1-008 107169000-107182576 protein_coding
  ENST00000468116 HBP1-005 107169767-107174527 processed_transcript
  ENST00000468401 HBP1-006 107169720-107179978 protein_coding
  ENST00000468410 HBP1-002 107168961-107202508 protein_coding
  ENST00000478930 HBP1-004 107168990-107182415 protein_coding
  ENST00000479011 HBP1-009 107179626-107182536 protein_coding
  ENST00000483809 HBP1-011 107189876-107195973 retained_intron
  ENST00000485846 HBP1-003 107169773-107201635 protein_coding
  ENST00000497535 HBP1-007 107169769-107182528 protein_coding
  ENST00000498408 HBP1-013 107179918-107197122 protein_coding
  ENST00000607681 HBP1-015 107195848-107200331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastKidneyLiverLungOvaryPlacentaTestisENST00000222574ENST00000463202ENST00000468410ENST00000485846ENST00000498408ENST00000607681
Transcript ID Adrenal Bladder Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000222574 N/A 4.139±0.00 N/A N/A 7.871±0.00 9.840±0.00 N/A 6.077±0.00 N/A
ENST00000463202 N/A 4.143±0.00 6.079±0.00 N/A 8.248±0.00 10.094±4.60 10.458±0.00 N/A N/A
ENST00000468410 N/A N/A N/A 3.598±0.00 N/A N/A N/A N/A N/A
ENST00000485846 10.815±0.00 N/A 4.880±0.00 N/A N/A 11.254±0.00 9.837±0.00 N/A 10.998±3.30
ENST00000498408 N/A N/A N/A 5.552±0.00 N/A N/A N/A N/A N/A
ENST00000607681 N/A N/A N/A N/A N/A N/A 59.545±0.00 69.702±0.00 82.178±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007050 NAS cell cycle arrest
GO:0016055 IEA Wnt signaling pathway
GO:0043268 IEA positive regulation of potassium ion transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028517 hbp1 HMG-box transcription factor 1 protein_coding Danio_rerio
ENSMUSG00000002996 Hbp1 high mobility group box transcription factor 1 protein_coding Mus_musculus

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