C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetraspanin 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106025 TSPAN12 9606 - 7:120787320-120858402 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222747 TSPAN12-001 120787320-120858357 protein_coding
  ENST00000415871 TSPAN12-002 120788374-120858323 protein_coding
  ENST00000424710 TSPAN12-006 120815751-120857199 protein_coding
  ENST00000430985 TSPAN12-004 120838777-120858402 protein_coding
  ENST00000433758 TSPAN12-005 120815729-120857353 protein_coding
  ENST00000441017 TSPAN12-007 120810489-120857124 protein_coding
  ENST00000450414 TSPAN12-003 120788322-120838797 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222747ENST00000415871ENST00000430985ENST00000433758ENST00000441017ENST00000450414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222747 1.440±0.00 N/A N/A 0.108±0.00 N/A N/A N/A N/A 0.970±0.00 N/A N/A 1.646±0.00 N/A 0.161±0.00
ENST00000415871 3.995±0.00 1.347±0.00 1.712±0.00 0.465±0.22 2.035±1.03 2.581±0.26 4.102±2.56 3.878±0.00 N/A N/A 0.234±0.00 2.346±1.59 2.415±0.00 0.641±0.00
ENST00000430985 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.667±0.00 0.155±0.00 N/A N/A N/A
ENST00000433758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.430±0.00 N/A 1.050±0.00
ENST00000441017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A 6.569±0.00 0.951±0.00
ENST00000450414 N/A N/A N/A N/A N/A N/A 1.379±0.00 N/A N/A N/A 0.260±0.00 1.827±0.00 1.542±0.00 0.300±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U7 CIL_0005U7_0002 CGP 7:120273668-120858402
CIL_0007SO CIL_0007SO_0001 VISTA 7:120596713-121200737
CIL_0004XL CIL_0004XL_0002 CGP 7:120787320-120977216

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005887 ISS integral component of plasma membrane
GO:0007166 ISS cell surface receptor signaling pathway
GO:0010842 ISS retina layer formation
GO:0016020 TAS membrane
GO:0016021 TAS:IEA integral component of membrane
GO:0045765 ISS regulation of angiogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032389 tspan12 tetraspanin 12 protein_coding Danio_rerio
ENSMUSG00000029669 Tspan12 tetraspanin 12 protein_coding Mus_musculus

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