C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin 1A (brain)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106089 STX1A 9606 - 7:73699206-73719672 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222812 STX1A-001 73699206-73719658 protein_coding
  ENST00000395154 STX1A-010 73700729-73719657 protein_coding
  ENST00000395155 STX1A-003 73700827-73719631 protein_coding
  ENST00000395156 STX1A-002 73699206-73719659 protein_coding
  ENST00000461441 STX1A-013 73702537-73704191 retained_intron
  ENST00000462135 STX1A-007 73704180-73719672 retained_intron
  ENST00000470878 STX1A-004 73702845-73719626 processed_transcript
  ENST00000480126 STX1A-011 73700287-73704259 processed_transcript
  ENST00000484736 STX1A-012 73699759-73700931 processed_transcript
  ENST00000491427 STX1A-008 73700783-73704496 retained_intron
  ENST00000491645 STX1A-014 73700316-73701210 processed_transcript
  ENST00000494245 STX1A-006 73703763-73705465 retained_intron
  ENST00000496216 STX1A-005 73700805-73705880 processed_transcript
  ENST00000497980 STX1A-009 73700777-73704055 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastENST00000222812ENST00000395155ENST00000462135ENST00000480126
Transcript ID Bladder Brain Breast
ENST00000222812 N/A 26.634±4.64 N/A
ENST00000395155 N/A N/A 2.860±0.00
ENST00000462135 N/A 22.696±0.00 N/A
ENST00000480126 1.410±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0001948 IEA glycoprotein binding
GO:0001956 IEA positive regulation of neurotransmitter secretion
GO:0005484 IEA SNAP receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0006112 TAS energy reserve metabolic process
GO:0006886 IEA intracellular protein transport
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0008021 IEA synaptic vesicle
GO:0009629 IEA response to gravity
GO:0010807 IEA regulation of synaptic vesicle priming
GO:0014047 TAS glutamate secretion
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016081 IEA synaptic vesicle docking involved in exocytosis
GO:0016192 IEA vesicle-mediated transport
GO:0017022 IEA myosin binding
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0017157 IEA regulation of exocytosis
GO:0019855 IEA calcium channel inhibitor activity
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0030141 IEA secretory granule
GO:0030672 IEA synaptic vesicle membrane
GO:0030674 IEA protein binding, bridging
GO:0031201 TAS SNARE complex
GO:0032028 IEA myosin head/neck binding
GO:0032940 IDA secretion by cell
GO:0042641 IEA actomyosin
GO:0043005 IDA neuron projection
GO:0043008 IEA ATP-dependent protein binding
GO:0043229 IEA intracellular organelle
GO:0043234 IEA protein complex
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045921 IEA positive regulation of exocytosis
GO:0046982 IEA protein heterodimerization activity
GO:0047485 IEA protein N-terminus binding
GO:0048306 IEA calcium-dependent protein binding
GO:0050796 TAS regulation of insulin secretion
GO:0070032 IEA synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex
GO:0070033 IEA synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex
GO:0070044 IEA synaptobrevin 2-SNAP-25-syntaxin-1a complex
GO:2000463 IEA positive regulation of excitatory postsynaptic membrane potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058994 stx1a syntaxin 1A (brain) protein_coding Danio_rerio
ENSMUSG00000007207 Stx1a syntaxin 1A (brain) protein_coding Mus_musculus

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