C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 1A (brain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222812 STX1A-001 ENSG00000106089 9606 - 7:73699206-73719658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000222812
Transcript ID Brain
ENST00000222812 26.634±4.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0001948 IEA glycoprotein binding
GO:0001956 IEA positive regulation of neurotransmitter secretion
GO:0005484 IEA SNAP receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0006112 TAS energy reserve metabolic process
GO:0006886 IEA intracellular protein transport
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0008021 IEA synaptic vesicle
GO:0009629 IEA response to gravity
GO:0010807 IEA regulation of synaptic vesicle priming
GO:0014047 TAS glutamate secretion
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016081 IEA synaptic vesicle docking involved in exocytosis
GO:0016192 IEA vesicle-mediated transport
GO:0017022 IEA myosin binding
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0017157 IEA regulation of exocytosis
GO:0019855 IEA calcium channel inhibitor activity
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0030141 IEA secretory granule
GO:0030672 IEA synaptic vesicle membrane
GO:0030674 IEA protein binding, bridging
GO:0031201 TAS SNARE complex
GO:0032028 IEA myosin head/neck binding
GO:0032940 IDA secretion by cell
GO:0042641 IEA actomyosin
GO:0043005 IDA neuron projection
GO:0043008 IEA ATP-dependent protein binding
GO:0043229 IEA intracellular organelle
GO:0043234 IEA protein complex
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045921 IEA positive regulation of exocytosis
GO:0046982 IEA protein heterodimerization activity
GO:0047485 IEA protein N-terminus binding
GO:0048306 IEA calcium-dependent protein binding
GO:0050796 TAS regulation of insulin secretion
GO:0070032 IEA synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex
GO:0070033 IEA synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex
GO:0070044 IEA synaptobrevin 2-SNAP-25-syntaxin-1a complex
GO:2000463 IEA positive regulation of excitatory postsynaptic membrane potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005509 Stx1a-001 protein_coding Mus_musculus 0 1304
ENSMUST00000150838 Stx1a-003 nonsense_mediated_decay Mus_musculus 0 959
ENSMUST00000133812 Stx1a-005 processed_transcript Mus_musculus 0 736
ENSMUST00000156626 Stx1a-002 retained_intron Mus_musculus 0 647
ENSMUST00000144198 Stx1a-004 processed_transcript Mus_musculus 0 612

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