C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fascin actin-bundling protein 3, testicular
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106328 FSCN3 9606 + 7:127591409-127602144 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265825 FSCN3-001 127593635-127602144 protein_coding
  ENST00000421705 FSCN3-003 127593742-127595485 nonsense_mediated_decay
  ENST00000469242 FSCN3-004 127595441-127596618 retained_intron
  ENST00000478328 FSCN3-005 127591409-127595468 processed_transcript
  ENST00000478821 FSCN3-002 127593728-127596330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000265825
Transcript ID Testis
ENST00000265825 21.723±7.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LN CIL_0008LN_0001 VISTA 7:127234332-127837492
CIL_0001OK CIL_0001OK_0001 CGP 7:127346790-127593611
CIL_0001OJ CIL_0001OJ_0001 CGP 7:127580618-127593611
CIL_0001OI CIL_0001OI_0001 CGP 7:127588345-127602144
CIL_0001OH CIL_0001OH_0001 CGP 7:127591409-127615928

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 TAS cytoskeleton
GO:0015629 ISS actin cytoskeleton
GO:0030674 IEA protein binding, bridging
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000029707 Fscn3 fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus) protein_coding Mus_musculus

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