C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CAP-GLY domain containing linker protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106665 CLIP2 9606 + 7:74289475-74405943 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223398 CLIP2-201 74289475-74405943 protein_coding
  ENST00000361545 CLIP2-001 74289475-74405930 protein_coding
  ENST00000395060 CLIP2-002 74317547-74403848 protein_coding
  ENST00000474962 CLIP2-007 74388670-74397173 retained_intron
  ENST00000482424 CLIP2-005 74380024-74389149 retained_intron
  ENST00000487091 CLIP2-003 74376070-74381041 retained_intron
  ENST00000487447 CLIP2-008 74400482-74404326 protein_coding
  ENST00000491075 CLIP2-004 74386384-74389432 retained_intron
  ENST00000493166 CLIP2-006 74376695-74397165 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223398ENST00000361545ENST00000395060ENST00000487091
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223398 N/A 1.054±0.00 N/A 14.352±11.96 N/A N/A N/A 1.383±0.00 0.459±0.00 N/A N/A N/A 1.306±0.24 N/A
ENST00000361545 6.163±0.00 5.531±0.00 0.852±0.00 4.618±2.47 3.114±1.21 8.732±7.27 0.778±0.57 1.344±1.12 0.856±0.35 8.451±0.00 1.041±0.00 18.561±19.59 7.560±0.02 4.130±1.52
ENST00000395060 N/A N/A 0.309±0.00 7.687±3.54 0.518±0.00 2.125±0.00 0.412±0.00 N/A 2.462±0.00 0.473±0.00 0.524±0.00 5.066±3.80 6.814±0.00 1.859±0.02
ENST00000487091 N/A N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007F CIL_00007F_0002 CGP 7:74289475-74602604

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005875 TAS microtubule associated complex
GO:0005881 IEA cytoplasmic microtubule
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0035371 IEA microtubule plus-end
GO:0051010 IEA microtubule plus-end binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059596 clip2 CAP-GLY domain containing linker protein 2 protein_coding Danio_rerio
ENSMUSG00000063146 Clip2 CAP-GLY domain containing linker protein 2 protein_coding Mus_musculus

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